RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 ZSWIM2Q8NEG5 633 aa9.79□□□□□ -0.84
NR1I3-228ENST00000511676 RSPH1Q8WYR4 309 aa9.79□□□□□ -0.84
NR1I3-228ENST00000511676 TOP1MTQ969P6 601 aa9.79□□□□□ -0.84
NR1I3-228ENST00000511676 ZBTB10Q96DT7 871 aa9.79□□□□□ -0.84
NR1I3-228ENST00000511676 OSMRQ99650 979 aa9.79□□□□□ -0.84
NR1I3-228ENST00000511676 TSGA10Q9BZW7 698 aa9.79□□□□□ -0.84
NR1I3-228ENST00000511676 NSUN3Q9H649 340 aaKnown RBP9.79□□□□□ -0.84
NR1I3-228ENST00000511676 HAUS4Q9H6D7 363 aa9.79□□□□□ -0.84
NR1I3-228ENST00000511676 NHEJ1Q9H9Q4 299 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-228ENST00000511676 NLRC4Q9NPP4 1024 aa9.79□□□□□ -0.84
NR1I3-228ENST00000511676 DNAJC12Q9UKB3 198 aa9.79□□□□□ -0.84
NR1I3-228ENST00000511676 ITGA11Q9UKX5 1188 aa9.79□□□□□ -0.84
NR1I3-228ENST00000511676 PPP2R2CQ9Y2T4 447 aa9.79□□□□□ -0.84
NR1I3-228ENST00000511676 FHOD1Q9Y613 1164 aa9.79□□□□□ -0.84
NR1I3-228ENST00000511676 KAT6AQ92794 2004 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 SOWAHDA6NJG2 315 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 H3BNC9 293 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 XPOTO43592 962 aaKnown RBP9.78□□□□□ -0.84
NR1I3-228ENST00000511676 ASS1P00966 412 aaKnown RBP9.78□□□□□ -0.84
NR1I3-228ENST00000511676 HLA-DRAP01903 254 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 PAX3P23760 479 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 PIK3CAP42336 1068 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 BPIFB4P59827 614 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 YWHAEP62258 255 aaKnown RBP9.78□□□□□ -0.84
NR1I3-228ENST00000511676 HTRA4P83105 476 aaPredicted RBP9.78□□□□□ -0.84
NR1I3-228ENST00000511676 KLHL30Q0D2K2 578 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 NCOA4Q13772 614 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 DRAP1Q14919 205 aaPredicted RBP9.78□□□□□ -0.84
NR1I3-228ENST00000511676 SPA17Q15506 151 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 SLC18A3Q16572 532 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 SGSM1Q2NKQ1 1148 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 TRIM71Q2Q1W2 868 aaKnown RBP9.78□□□□□ -0.84
NR1I3-228ENST00000511676 PLEKHG4Q58EX7 1191 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 XKR4Q5GH76 650 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 TDRD10Q5VZ19 366 aaKnown RBP9.78□□□□□ -0.84
NR1I3-228ENST00000511676 PHLDB3Q6NSJ2 640 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 PPP1R2P3Q6NXS1 205 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 RAD9BQ6WBX8 426 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 NYAP1Q6ZVC0 841 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 TRAPPC11Q7Z392 1133 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 IRF2BP2Q7Z5L9 587 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 ZBTB33Q86T24 672 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 ZNF677Q86XU0 584 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 FAM71AQ8IYT1 594 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 FIBCD1Q8N539 461 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 HELQQ8TDG4 1101 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 TAS1R2Q8TE23 839 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 UBE2Q2Q8WVN8 375 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 ZNF516Q92618 1163 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 PABPC5Q96DU9 382 aaKnown RBP9.78□□□□□ -0.84
NR1I3-228ENST00000511676 PPP1R13BQ96KQ4 1090 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 CALR3Q96L12 384 aaKnown RBP9.78□□□□□ -0.84
NR1I3-228ENST00000511676 SNX27Q96L92 541 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 ACAP3Q96P50 834 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 LRFN3Q9BTN0 628 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 DEF6Q9H4E7 631 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 CERS4Q9HA82 394 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 AAASQ9NRG9 546 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 CNTN3Q9P232 1028 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 ARHGAP20Q9P2F6 1191 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 INTUQ9ULD6 942 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 CNTN6Q9UQ52 1028 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 CDY2AQ9Y6F7 541 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 RALGAPA2Q2PPJ7 1873 aa9.78□□□□□ -0.84
NR1I3-228ENST00000511676 LINC01553A4QN01 128 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 BTNL10A8MVZ5 291 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 KRT86O43790 486 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 RPS6KA5O75582 802 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 VNN1O95497 513 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 P4HA1P13674 534 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 KCNE1P15382 129 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 CYP3A5P20815 502 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 TNFSF9P41273 254 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 KCNQ1P51787 676 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 KIF11P52732 1056 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 ZNF200P98182 395 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-228ENST00000511676 TFF2Q03403 129 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 GOLGA8FQ08AF8 430 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 GOLGA8DPQ0D2H9 430 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 BIRC3Q13489 604 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 GPM6BQ13491 265 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 PTPN14Q15678 1187 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 TDRD12Q587J7 1177 aaKnown RBP9.77□□□□□ -0.85
NR1I3-228ENST00000511676 ZBTB41Q5SVQ8 909 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 ZNF618Q5T7W0 954 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 PTCRAQ6ISU1 281 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-228ENST00000511676 PDE12Q6L8Q7 609 aaKnown RBP9.77□□□□□ -0.85
NR1I3-228ENST00000511676 ALKAL1Q6UXT8 129 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-228ENST00000511676 FAM228AQ86W67 206 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 REXO1L1PQ8IX06 675 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 THNSL1Q8IYQ7 743 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 EFCAB3Q8N7B9 438 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 LRRC52Q8N7C0 313 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 TMEM40Q8WWA1 233 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 CHP1Q99653 195 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 MFRPQ9BY79 579 aa9.77□□□□□ -0.85
NR1I3-228ENST00000511676 IFIH1Q9BYX4 1025 aaKnown RBP9.77□□□□□ -0.85
NR1I3-228ENST00000511676 TRIM6Q9C030 488 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-228ENST00000511676 GPR88Q9GZN0 384 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms