RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 KIAA1586Q9HCI6 787 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 CHST12Q9NRB3 414 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 GEMIN8Q9NWZ8 242 aaKnown RBP4.1□□□□□ -1.75
CHD1-207ENST00000511628 LRIT1Q9P2V4 623 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 SLC23A1Q9UHI7 598 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 KCNE5Q9UJ90 142 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 LIMCH1Q9UPQ0 1083 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 SIK3Q9Y2K2 1263 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 COL4A3Q01955 1670 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 TRGV11A0A075B6L2 103 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 A6NNZ2 444 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 KIAA0355O15063 1070 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 AP1G1O43747 822 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 ORC4O43929 436 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 HAUS5O94927 633 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 AMY1AP04745 511 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 POU2F2P09086 479 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 SMARCA1P28370 1054 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 CTXN1P60606 82 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 CDC42EP1Q00587 391 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 ZNF844Q08AG5 666 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 GFOD2Q3B7J2 385 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 C3orf36Q3SXR2 165 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 PREPLQ4J6C6 727 aaPredicted RBP4.09□□□□□ -1.75
CHD1-207ENST00000511628 IFIT1BQ5T764 474 aaKnown RBP4.09□□□□□ -1.75
CHD1-207ENST00000511628 METRNLQ641Q3 311 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 OLFML1Q6UWY5 402 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 ZGPATQ8N5A5 531 aaKnown RBP4.09□□□□□ -1.75
CHD1-207ENST00000511628 SLC9A6Q92581 669 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 BOD1Q96IK1 185 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 Q96MF0 132 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 TAAR9Q96RI9 348 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 MED15Q96RN5 788 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 ADAM2Q99965 735 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 RSAD1Q9HA92 442 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 CDYLQ9Y232 598 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 IPPQ9Y573 584 aa4.09□□□□□ -1.75
CHD1-207ENST00000511628 WNT10BO00744 389 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 GRM6O15303 877 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 HTRA2O43464 458 aaPredicted RBP4.08□□□□□ -1.76
CHD1-207ENST00000511628 PRSS23O95084 383 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 ESRRBO95718 433 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 PDCP20941 246 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 TGM1P22735 817 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 PLA2G5P39877 138 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 SEC24CP53992 1094 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 NOMO3P69849 1222 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 MRPS35P82673 323 aaKnown RBP4.08□□□□□ -1.76
CHD1-207ENST00000511628 GTF2H3Q13889 308 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 RAB39AQ14964 217 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 MINDY4Q4G0A6 757 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 PABPC1LQ4VXU2 614 aaKnown RBP4.08□□□□□ -1.76
CHD1-207ENST00000511628 NOMO2Q5JPE7 1267 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 ATAT1Q5SQI0 421 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 UTP14CQ5TAP6 766 aaKnown RBP4.08□□□□□ -1.76
CHD1-207ENST00000511628 B3GNTL1Q67FW5 361 aaPredicted RBP4.08□□□□□ -1.76
CHD1-207ENST00000511628 CYB5RLQ6IPT4 315 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 DGKHQ86XP1 1220 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 MIER2Q8N344 545 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 PRR18Q8N4B5 295 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 PPP1R35Q8TAP8 253 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 SLC35G2Q8TBE7 412 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 CAGE1Q8TC20 777 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 HPS3Q969F9 1004 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 CCDC136Q96JN2 1154 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 CLPTM1LQ96KA5 538 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 HEPHQ9BQS7 1158 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 AIFM2Q9BRQ8 373 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 NMRK2Q9NPI5 230 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 FAM30AQ9NZY2 134 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 PTGFRNQ9P2B2 879 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 INSL6Q9Y581 213 aa4.08□□□□□ -1.76
CHD1-207ENST00000511628 POLR2AP24928 1970 aaKnown RBP4.07□□□□□ -1.76
CHD1-207ENST00000511628 SPATA31A6Q5VVP1 1343 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 GOLGA6CA6NDK9 693 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 GOLGA6BA6NDN3 693 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 CCDC154A6NI56 674 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 PEX1O43933 1283 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 DTNBO60941 627 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 AGFG2O95081 481 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 CD1AP06126 327 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 ELANEP08246 267 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 GNAI3P08754 354 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 GOLGA6DP0CG33 693 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 EGR2P11161 476 aaPredicted RBP4.07□□□□□ -1.76
CHD1-207ENST00000511628 HSPA6P17066 643 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 PROZP22891 400 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 AKAP5P24588 427 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 WASP42768 502 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 GNAI1P63096 354 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 FPGSQ05932 587 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 IL10RAQ13651 578 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 GBX1Q14549 363 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 ARHGAP29Q52LW3 1261 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 DACT2Q5SW24 774 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 SLC4A10Q6U841 1118 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 Q6ZNX1 250 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 GPR149Q86SP6 731 aa4.07□□□□□ -1.76
CHD1-207ENST00000511628 COL23A1Q86Y22 540 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms