RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 PPP1R2P41236 205 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 DRG2P55039 364 aaKnown RBP7.72□□□□□ -1.17
CPNE4-208ENST00000511604 PTENP60484 403 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 XIAPP98170 497 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 PDE4DQ08499 809 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 LRRC41Q15345 812 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 TRMT5Q32P41 509 aaKnown RBP7.72□□□□□ -1.17
CPNE4-208ENST00000511604 SLC9C1Q4G0N8 1177 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 KIAA1755Q5JYT7 1200 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 PPP1R2P3Q6NXS1 205 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 TTC23LQ6PF05 361 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 DCLRE1AQ6PJP8 1040 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 DTHD1Q6ZMT9 781 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 MAMSTRQ6ZN01 415 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 RIPOR1Q6ZS17 1223 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 USP43Q70EL4 1123 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 ADGRG6Q86SQ4 1221 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 ZNF654Q8IZM8 581 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 LZTR1Q8N653 840 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 CHPT1Q8WUD6 406 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 NSL1Q96IY1 281 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 RUNDC3BQ96NL0 473 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 ZNF287Q9HBT7 754 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 UBN1Q9NPG3 1134 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 DISC1Q9NRI5 854 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 C6orf203Q9P0P8 240 aaPredicted RBP7.72□□□□□ -1.17
CPNE4-208ENST00000511604 MTRF1LQ9UGC7 380 aaKnown RBP7.72□□□□□ -1.17
CPNE4-208ENST00000511604 GTF3C4Q9UKN8 822 aa7.72□□□□□ -1.17
CPNE4-208ENST00000511604 KDM3BQ7LBC6 1761 aa7.71□□□□□ -1.17
CPNE4-208ENST00000511604 FMN2Q9NZ56 1722 aa7.71□□□□□ -1.17
CPNE4-208ENST00000511604 GUCY1B2O75343 617 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 SPAG7O75391 227 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 HSPA1AP0DMV8 641 aaKnown RBP7.71□□□□□ -1.18
CPNE4-208ENST00000511604 HSPA1BP0DMV9 641 aaKnown RBP7.71□□□□□ -1.18
CPNE4-208ENST00000511604 KRT4P19013 534 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 CCNE1P24864 410 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 IL15P40933 162 aaPredicted RBP7.71□□□□□ -1.18
CPNE4-208ENST00000511604 WDR4P57081 412 aaKnown RBP7.71□□□□□ -1.18
CPNE4-208ENST00000511604 NUP107P57740 925 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 ACTR3P61158 418 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 IFIT5Q13325 482 aaKnown RBP7.71□□□□□ -1.18
CPNE4-208ENST00000511604 ZNF211Q13398 564 aaPredicted RBP7.71□□□□□ -1.18
CPNE4-208ENST00000511604 WTAPQ15007 396 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 MIER3Q7Z3K6 550 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 NET1Q7Z628 596 aaPredicted RBP7.71□□□□□ -1.18
CPNE4-208ENST00000511604 PRUNE1Q86TP1 453 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 IFNL3Q8IZI9 196 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 LSMEM2Q8N112 164 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 ABTB2Q8N961 1025 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 LRRC57Q8N9N7 239 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 DDI1Q8WTU0 396 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 WASF1Q92558 559 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 BORCS5Q969J3 196 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 STRBPQ96SI9 672 aaKnown RBP7.71□□□□□ -1.18
CPNE4-208ENST00000511604 SPZ1Q9BXG8 430 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 B3GNT4Q9C0J1 378 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 GLT8D2Q9H1C3 349 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 LIN28AQ9H9Z2 209 aaKnown RBP7.71□□□□□ -1.18
CPNE4-208ENST00000511604 DNAJC17Q9NVM6 304 aaKnown RBP7.71□□□□□ -1.18
CPNE4-208ENST00000511604 GRHL1Q9NZI5 618 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 ARMCX3Q9UH62 379 aaPredicted RBP7.71□□□□□ -1.18
CPNE4-208ENST00000511604 VPS51Q9UID3 782 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 ERVK-11Q9UQG0 969 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 PCDHGA3Q9Y5H0 932 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 DISP2A7MBM2 1401 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 FAM187AA6NFU0 413 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 CDK2AP1O14519 115 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 ITM2AO43736 263 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 MAGEC1O60732 1142 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 KRT75O95678 551 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 DDX5P17844 614 aaKnown RBP7.71□□□□□ -1.18
CPNE4-208ENST00000511604 S100A5P33763 92 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 NR1H2P55055 460 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 FOLH1Q04609 750 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 ATP1A4Q13733 1029 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 NCOA4Q13772 614 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 SLC18A3Q16572 532 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 BOLA3Q53S33 107 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 C6orf163Q5TEZ5 329 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 TMCO4Q5TGY1 634 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 DCAF12L1Q5VU92 463 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 TWF2Q6IBS0 349 aaKnown RBP7.71□□□□□ -1.18
CPNE4-208ENST00000511604 DHDDSQ86SQ9 333 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 NLRX1Q86UT6 975 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 CCDC84Q86UT8 332 aaPredicted RBP7.71□□□□□ -1.18
CPNE4-208ENST00000511604 ANKLE2Q86XL3 938 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 JAMLQ86YT9 394 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 ZDHHC14Q8IZN3 488 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 MARVELD2Q8N4S9 558 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 DCLK2Q8N568 766 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.71□□□□□ -1.18
CPNE4-208ENST00000511604 PCYOX1LQ8NBM8 494 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 RNF169Q8NCN4 708 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 LILRB4Q8NHJ6 448 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 CALML6Q8TD86 181 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 GIPC2Q8TF65 315 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 FAM172AQ8WUF8 416 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 ERLEC1Q96DZ1 483 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 SGF29Q96ES7 293 aa7.71□□□□□ -1.18
CPNE4-208ENST00000511604 OTUD5Q96G74 571 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms