RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 C16orf96A6NNT2 1141 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 RASA4BC9J798 803 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 INO80B-WBP1J3KQ70 363 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 KLHL41O60662 606 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 GPC4O75487 556 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 PLS3P13797 630 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 ABCB4P21439 1286 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 DNAJB1P25685 340 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 SERPINB5P36952 375 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 VAMP7P51809 220 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 MDM2Q00987 491 aaPredicted RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 MORF4L2Q15014 288 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 RNF168Q8IYW5 571 aaPredicted RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 PPM1KQ8N3J5 372 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 DENND1AQ8TEH3 1009 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 SPIRE2Q8WWL2 714 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 REPS1Q96D71 796 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 OSBPL10Q9BXB5 764 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 AP1M1Q9BXS5 423 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 VPS16Q9H269 839 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 MUC13Q9H3R2 512 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 INTS9Q9NV88 658 aaKnown RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 SUCLA2Q9P2R7 463 aaPredicted RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 TJP2Q9UDY2 1190 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 ZNF148Q9UQR1 794 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 CNTNAP2Q9UHC6 1331 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 C21orf2O43822 256 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 DNAJA2O60884 412 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 RNASEH1O60930 286 aaKnown RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 ZNF543Q08ER8 600 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 C11orf63Q6NUN7 778 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 NCAPG2Q86XI2 1143 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 CERKQ8TCT0 537 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 TRERF1Q96PN7 1200 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 LBHD1Q9BQE6 289 aaPredicted RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 DCP1AQ9NPI6 582 aaPredicted RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 RYDENQ9NUL5 291 aaKnown RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 MTMR4Q9NYA4 1195 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 SLC9A2Q9UBY0 812 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 ANKRD6Q9Y2G4 727 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 CKAP5Q14008 2032 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 PLIN4Q96Q06 1357 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 ECE2O60344 883 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 A1BGP04217 495 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 PLCG1P19174 1290 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 SREBF1P36956 1147 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 CDK7P50613 346 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 MMEL1Q495T6 779 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 RARS2Q5T160 578 aaKnown RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 C20orf194Q5TEA3 1177 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 MMS22LQ6ZRQ5 1243 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 HERC6Q8IVU3 1022 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 PYROXD1Q8WU10 500 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 ZNF653Q96CK0 615 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 RILPQ96NA2 401 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 UBE2OQ9C0C9 1292 aaKnown RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 ATAD3AQ9NVI7 634 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 THG1LQ9NWX6 298 aaKnown RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 APPL1Q9UKG1 709 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 SHANK3Q9BYB0 1731 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 ASCC3Q8N3C0 2202 aaKnown RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 ARHGAP42A6NI28 874 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 TECP42680 631 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 DR1Q01658 176 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 POU5F1BQ06416 359 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 SULT2A1Q06520 285 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 EPS8Q12929 822 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 STX5Q13190 355 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 TCEA2Q15560 299 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 SLC18A3Q16572 532 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 NFIL3Q16649 462 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 ZNF394Q53GI3 561 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 PCNX4Q63HM2 1172 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 C2orf15Q8WU43 125 aaKnown RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 PTCD2Q8WV60 388 aaKnown RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 TEKT4Q8WW24 435 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 CCDC85AQ96PX6 553 aaPredicted RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 ADGRE3Q9BY15 652 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 TRIM55Q9BYV6 548 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 TAF1DQ9H5J8 278 aaPredicted RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 VCPKMTQ9H867 229 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 SMURF2Q9HAU4 748 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 PCDH10Q9P2E7 1040 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 KCNK3O14649 394 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 IFNA14P01570 189 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 PAEPP09466 180 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 UQCRBP14927 111 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 PHKG1Q16816 387 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 FRA10AC1Q70Z53 315 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 NATD1Q8N6N6 113 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 COG1Q8WTW3 980 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 ANKRD7Q92527 254 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 MMS19Q96T76 1030 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 RPRD1BQ9NQG5 326 aaKnown RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 VPS51Q9UID3 782 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 TRIM66O15016 1216 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 FGF10O15520 208 aaPredicted RBP5.19□□□□□ -1.58
PTPN13-209ENST00000511467 SOX5P35711 763 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 KRT20P35900 424 aa5.19□□□□□ -1.58
PTPN13-209ENST00000511467 PPM1FP49593 454 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms