RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 SLC5A5Q92911 643 aa13.72□□□□□ -0.21
HMGB2-205ENST00000511316 HVCN1Q96D96 273 aa13.72□□□□□ -0.21
HMGB2-205ENST00000511316 ANKRD27Q96NW4 1050 aa13.72□□□□□ -0.21
HMGB2-205ENST00000511316 JPH2Q9BR39 696 aaPredicted RBP13.72□□□□□ -0.21
HMGB2-205ENST00000511316 REEP2Q9BRK0 252 aa13.72□□□□□ -0.21
HMGB2-205ENST00000511316 ODF2LQ9ULJ1 636 aa13.72□□□□□ -0.21
HMGB2-205ENST00000511316 NOP56O00567 594 aaKnown RBP13.71□□□□□ -0.21
HMGB2-205ENST00000511316 MED24O75448 989 aa13.71□□□□□ -0.21
HMGB2-205ENST00000511316 AKAP3O75969 853 aa13.71□□□□□ -0.21
HMGB2-205ENST00000511316 TNFAIP3P21580 790 aa13.71□□□□□ -0.21
HMGB2-205ENST00000511316 CYP2C18P33260 490 aa13.71□□□□□ -0.21
HMGB2-205ENST00000511316 RNASE9P60153 205 aaKnown RBP13.71□□□□□ -0.21
HMGB2-205ENST00000511316 SNRPFP62306 86 aaKnown RBP13.71□□□□□ -0.21
HMGB2-205ENST00000511316 TRIM71Q2Q1W2 868 aaKnown RBP13.71□□□□□ -0.21
HMGB2-205ENST00000511316 SEL1L2Q5TEA6 688 aa13.71□□□□□ -0.21
HMGB2-205ENST00000511316 TRAF7Q6Q0C0 670 aa13.71□□□□□ -0.21
HMGB2-205ENST00000511316 SYDE1Q6ZW31 735 aaPredicted RBP13.71□□□□□ -0.21
HMGB2-205ENST00000511316 ZNF577Q9BSK1 485 aa13.71□□□□□ -0.21
HMGB2-205ENST00000511316 WNT8AQ9H1J5 351 aa13.71□□□□□ -0.21
HMGB2-205ENST00000511316 PRDM5Q9NQX1 630 aaPredicted RBP13.71□□□□□ -0.21
HMGB2-205ENST00000511316 ZDHHC18Q9NUE0 388 aa13.71□□□□□ -0.21
HMGB2-205ENST00000511316 MCM8Q9UJA3 840 aa13.71□□□□□ -0.21
HMGB2-205ENST00000511316 DDX3YO15523 660 aaKnown RBP13.71□□□□□ -0.22
HMGB2-205ENST00000511316 MTA2O94776 668 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 FAM13AO94988 1023 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 GCNT3O95395 438 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 MMEP08473 750 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 RARGP13631 454 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 SPIRE1Q08AE8 756 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 ENOX2Q16206 610 aaKnown RBP13.71□□□□□ -0.22
HMGB2-205ENST00000511316 MARCH8Q5T0T0 291 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 SLC35G2Q8TBE7 412 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 BORCS6Q96GS4 357 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 IFT74Q96LB3 600 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 OSBPL7Q9BZF2 842 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 BATF3Q9NR55 127 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 TBC1D22BQ9NU19 505 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 INTS9Q9NV88 658 aaKnown RBP13.71□□□□□ -0.22
HMGB2-205ENST00000511316 DONSONQ9NYP3 566 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 APEX2Q9UBZ4 518 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 ATP8A1Q9Y2Q0 1164 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 PCDHB13Q9Y5F0 798 aa13.71□□□□□ -0.22
HMGB2-205ENST00000511316 TRIP12Q14669 1992 aaPredicted RBP13.7□□□□□ -0.22
HMGB2-205ENST00000511316 EMSYQ7Z589 1322 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 O00370 1275 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 PMM2O15305 246 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 BUB1BO60566 1050 aaPredicted RBP13.7□□□□□ -0.22
HMGB2-205ENST00000511316 SMIM10L2AP0DMW4 78 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 SMIM10L2BP0DMW5 78 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 ACTN1P12814 892 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 FMO5P49326 533 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 CAV1Q03135 178 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 PLPPR4Q7Z2D5 763 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 PIGWQ7Z7B1 504 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 JAMLQ86YT9 394 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 CCDC60Q8IWA6 550 aaPredicted RBP13.7□□□□□ -0.22
HMGB2-205ENST00000511316 ZNF317Q96PQ6 595 aaPredicted RBP13.7□□□□□ -0.22
HMGB2-205ENST00000511316 RIT2Q99578 217 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 SYT11Q9BT88 431 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 KATNAL1Q9BW62 490 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 NEUROG2Q9H2A3 272 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 SETD4Q9NVD3 440 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 TRPC6Q9Y210 931 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 LOXHD1Q8IVV2 1947 aa13.7□□□□□ -0.22
HMGB2-205ENST00000511316 DDX39AO00148 427 aaKnown RBP13.69□□□□□ -0.22
HMGB2-205ENST00000511316 MAPK13O15264 365 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 TREHO43280 583 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 SUPT20HL2P0C7V6 817 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 CSF2RAP15509 400 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 RAG1P15918 1043 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 ELF1P32519 619 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 SLC8A3P57103 927 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 CRYMQ14894 314 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 CYP1B1Q16678 543 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 HABP4Q5JVS0 413 aaKnown RBP13.69□□□□□ -0.22
HMGB2-205ENST00000511316 C9orf50Q5SZB4 431 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 POTEGQ6S5H5 508 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 ATP8B4Q8TF62 1192 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 ATXN2LQ8WWM7 1075 aaKnown RBP13.69□□□□□ -0.22
HMGB2-205ENST00000511316 SLCO2A1Q92959 643 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 RSRC1Q96IZ7 334 aaKnown RBP13.69□□□□□ -0.22
HMGB2-205ENST00000511316 HIPK3Q9H422 1215 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 PARVGQ9HBI0 331 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 DNAJC12Q9UKB3 198 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 SLC12A4Q9UP95 1085 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 MAFBQ9Y5Q3 323 aaPredicted RBP13.69□□□□□ -0.22
HMGB2-205ENST00000511316 CHD9Q3L8U1 2897 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 ZBTB42B2RXF5 422 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 KIAA0391O15091 583 aaKnown RBP13.69□□□□□ -0.22
HMGB2-205ENST00000511316 MAPTP10636 758 aaKnown RBP13.69□□□□□ -0.22
HMGB2-205ENST00000511316 GZMAP12544 262 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 KRT13P13646 458 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 CTNNA2P26232 953 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 DRAP1Q14919 205 aaPredicted RBP13.69□□□□□ -0.22
HMGB2-205ENST00000511316 TRADDQ15628 312 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 FAM47CQ5HY64 1035 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 ZNF746Q6NUN9 644 aaPredicted RBP13.69□□□□□ -0.22
HMGB2-205ENST00000511316 SERINC5Q86VE9 423 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 DDX42Q86XP3 938 aaKnown RBP eCLIP13.69□□□□□ -0.221e-22■■■□□ 14.6
HMGB2-205ENST00000511316 C7orf31Q8N865 590 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms