RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 AMHP03971 560 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 GJB1P08034 283 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 RAP2AP10114 183 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 MYL4P12829 197 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 SLC6A4P31645 630 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 KCNJ5P48544 419 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 RRADP55042 308 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 CTBP1Q13363 440 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 LMBRD2Q68DH5 695 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 TXNDC5Q8NBS9 432 aaKnown RBP6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 OR5M3Q8NGP4 307 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 BRD9Q9H8M2 597 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 KCNK12Q9HB15 430 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 IL23AQ9NPF7 189 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 PNMA2Q9UL42 364 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 MAGED2Q9UNF1 606 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 PLEKHM1Q9Y4G2 1056 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 CEP83Q9Y592 693 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 SLC4A7Q9Y6M7 1214 aa6.51□□□□□ -1.37
HMGB1P47-201ENST00000511281 SLC26A4O43511 780 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 KCNQ3O43525 872 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 HAUS5O94927 633 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 CHEK2O96017 543 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 SRGNP10124 158 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 TXNP10599 105 aaKnown RBP6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 ALAS1P13196 640 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 NPEPPSP55786 919 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 NOMO3P69849 1222 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 MXRA7P84157 204 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 DUSP8Q13202 625 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 PTK2BQ14289 1009 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 MAPRE1Q15691 268 aaKnown RBP6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 MLANAQ16655 118 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 PFKFB4Q16877 469 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 CNKSR3Q6P9H4 555 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 LVRNQ6Q4G3 990 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 DOK3Q7L591 496 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 KRT28Q7Z3Y7 464 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 RALYLQ86SE5 291 aaKnown RBP6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 TXLNBQ8N3L3 684 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 IPCEF1Q8WWN9 437 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 SCAMP4Q969E2 229 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 PWWP2AQ96N64 755 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 MYOCQ99972 504 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 SENP7Q9BQF6 1050 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 CHST8Q9H2A9 424 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 C9orf78Q9NZ63 289 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 SLC39A10Q9ULF5 831 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 CAPN11Q9UMQ6 739 aa6.5□□□□□ -1.37
HMGB1P47-201ENST00000511281 M0R3H8 397 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 CNOT4O95628 575 aaKnown RBP6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 CYP1A1P04798 512 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 GNAI2P04899 355 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 DHRS4L1P0CG22 281 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 SERPINF1P36955 418 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 SLC11A2P49281 568 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 CARSP49589 748 aaKnown RBP6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 WNT3P56703 355 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 CLRN1P58418 232 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 BMT2Q1RMZ1 405 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 TANGO2Q6ICL3 276 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 MMS22LQ6ZRQ5 1243 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 ANKRD18AQ8IVF6 992 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 CARFQ8N187 725 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 AOPEPQ8N6M6 819 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 PAF1Q8N7H5 531 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 OR14K1Q8NGZ2 314 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 OR56A3Q8NH54 315 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 SLC35B2Q8TB61 432 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 ADAMTS17Q8TE56 1095 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 KCNN1Q92952 543 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 TBC1D20Q96BZ9 403 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 RPL10LQ96L21 214 aaKnown RBP6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 MAGEH1Q9H213 219 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 MAN2B2Q9Y2E5 1009 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 PNPLA7Q6ZV29 1317 aa6.49□□□□□ -1.37
HMGB1P47-201ENST00000511281 SCO2A0A1W2PP80 73 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 TCRBV7S2A1N4TA0A589 114 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 ETV2O00321 342 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 MATN2O00339 956 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 FFAR3O14843 346 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 HOXA3O43365 443 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 A1BGP04217 495 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 GABRB3P28472 473 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 ARL4CP56559 192 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 SSPNQ14714 243 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 RNF151Q2KHN1 245 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 FKBP15Q5T1M5 1219 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 USP17L6PQ6QN14 398 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 CLEC4GQ6UXB4 293 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 CYP26C1Q6V0L0 522 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 UNC13DQ70J99 1090 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 RNF44Q7L0R7 432 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 GPRIN1Q7Z2K8 1008 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 PPP1R32Q7Z5V6 425 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 KRT73Q86Y46 540 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 EID2BQ96D98 161 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 C18orf8Q96DM3 657 aa6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 LTV1Q96GA3 475 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P47-201ENST00000511281 LCORQ96JN0 433 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms