RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 MRPL10Q7Z7H8 261 aaKnown RBP4.3□□□□□ -1.72
RNF4-211ENST00000509206 TBC1D10CQ8IV04 446 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 CCDC60Q8IWA6 550 aaPredicted RBP4.3□□□□□ -1.72
RNF4-211ENST00000509206 CCDC116Q8IYX3 515 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 TSTD1Q8NFU3 115 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 CEP76Q8TAP6 659 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 ZSCAN18Q8TBC5 510 aaPredicted RBP4.3□□□□□ -1.72
RNF4-211ENST00000509206 PANK1Q8TE04 598 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 NLRP4Q96MN2 994 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 ASB16Q96NS5 453 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 TMEM209Q96SK2 561 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 CLSTN3Q9BQT9 956 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 OSBPL3Q9H4L5 887 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 CNNM2Q9H8M5 875 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 LY9Q9HBG7 655 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 AGO4Q9HCK5 861 aaKnown RBP4.3□□□□□ -1.72
RNF4-211ENST00000509206 POLMQ9NP87 494 aaPredicted RBP4.3□□□□□ -1.72
RNF4-211ENST00000509206 ZNF358Q9NW07 568 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 THG1LQ9NWX6 298 aaKnown RBP4.3□□□□□ -1.72
RNF4-211ENST00000509206 SUCLA2Q9P2R7 463 aaPredicted RBP4.3□□□□□ -1.72
RNF4-211ENST00000509206 NXF1Q9UBU9 619 aaKnown RBP4.3□□□□□ -1.72
RNF4-211ENST00000509206 EGFL7Q9UHF1 273 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 EVLQ9UI08 416 aaPredicted RBP4.3□□□□□ -1.72
RNF4-211ENST00000509206 SRPK3Q9UPE1 567 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 PCDHA10Q9Y5I2 948 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 HEMK1Q9Y5R4 338 aaPredicted RBP4.3□□□□□ -1.72
RNF4-211ENST00000509206 SHROOM3Q8TF72 1996 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 DOCK5Q9H7D0 1870 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 PCNX2A6NKB5 2137 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 PIEZO2Q9H5I5 2752 aa4.3□□□□□ -1.72
RNF4-211ENST00000509206 SPAG17Q6Q759 2223 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 MYH6P13533 1939 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 TTC41PQ6P2S7 1318 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 ZBTB42B2RXF5 422 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 B8ZZF3 427 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 F8W810 466 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 IPO5O00410 1097 aaKnown RBP4.29□□□□□ -1.72
RNF4-211ENST00000509206 IFIT3O14879 490 aaKnown RBP4.29□□□□□ -1.72
RNF4-211ENST00000509206 FOXP2O15409 715 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 SIAH2O43255 324 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 ALDH1A2O94788 518 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 MICAL2O94851 1124 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 ERLIN2O94905 339 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 STAU1O95793 577 aaKnown RBP4.29□□□□□ -1.72
RNF4-211ENST00000509206 CCNE2O96020 404 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 SYPP08247 313 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 SRGAP2CP0DJJ0 459 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 ATP4AP20648 1035 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 FCARP24071 287 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 MLH1P40692 756 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 ITGB3BPQ13352 177 aaPredicted RBP4.29□□□□□ -1.72
RNF4-211ENST00000509206 BYSLQ13895 437 aaKnown RBP4.29□□□□□ -1.72
RNF4-211ENST00000509206 CCINQ13939 588 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 RAB33AQ14088 237 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 HSP90AA2PQ14568 343 aaPredicted RBP4.29□□□□□ -1.72
RNF4-211ENST00000509206 IMMTQ16891 758 aaKnown RBP4.29□□□□□ -1.72
RNF4-211ENST00000509206 DUOXA1Q1HG43 343 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 ITPRIPL2Q3MIP1 535 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 MTERF2Q49AM1 385 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 ARHGAP29Q52LW3 1261 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 TXNDC11Q6PKC3 985 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 TOGARAM2Q6ZUX3 1019 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 PIP4P1Q86T03 277 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 ZNF410Q86VK4 478 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 PLA2G4DQ86XP0 818 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 SYT12Q8IV01 421 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 SIRT2Q8IXJ6 389 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 SMAP1Q8IYB5 467 aaPredicted RBP4.29□□□□□ -1.72
RNF4-211ENST00000509206 RNF168Q8IYW5 571 aaPredicted RBP4.29□□□□□ -1.72
RNF4-211ENST00000509206 CMTR1Q8N1G2 835 aaKnown RBP4.29□□□□□ -1.72
RNF4-211ENST00000509206 GALNT15Q8N3T1 639 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 CTCFLQ8NI51 663 aaPredicted RBP4.29□□□□□ -1.72
RNF4-211ENST00000509206 CCDC26Q8TAB7 109 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 LNX1Q8TBB1 728 aaPredicted RBP4.29□□□□□ -1.72
RNF4-211ENST00000509206 HASPINQ8TF76 798 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 SETD7Q8WTS6 366 aaKnown RBP4.29□□□□□ -1.72
RNF4-211ENST00000509206 RABGGTAQ92696 567 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 ACDQ96AP0 544 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 EVI5LQ96CN4 794 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 TCEAL4Q96EI5 215 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 SPACA7Q96KW9 195 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 ZSWIM3Q96MP5 696 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 PNMA5Q96PV4 448 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 JPH2Q9BR39 696 aaPredicted RBP4.29□□□□□ -1.72
RNF4-211ENST00000509206 ZNF577Q9BSK1 485 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 CYP4F11Q9HBI6 524 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 AVENQ9NQS1 362 aaPredicted RBP4.29□□□□□ -1.72
RNF4-211ENST00000509206 ASAH2Q9NR71 780 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 TBC1D22BQ9NU19 505 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 TOR4AQ9NXH8 423 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 GTSE1Q9NYZ3 720 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 DKK4Q9UBT3 224 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 PARP2Q9UGN5 583 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 EBF1Q9UH73 591 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 MBD1Q9UIS9 605 aaPredicted RBP4.29□□□□□ -1.72
RNF4-211ENST00000509206 DDX19BQ9UMR2 479 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 SLC6A14Q9UN76 642 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 CDY1Q9Y6F8 540 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 WASF2Q9Y6W5 498 aa4.29□□□□□ -1.72
RNF4-211ENST00000509206 CACNA1EQ15878 2313 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms