RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 ZNF696Q9H7X3 374 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 TYW1Q9NV66 732 aaKnown RBP10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 SENP1Q9P0U3 644 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 MTUS1Q9ULD2 1270 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 PLA2G4CQ9UP65 541 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 AXIN2Q9Y2T1 843 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 TIMM22Q9Y584 194 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 CEPT1Q9Y6K0 416 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 SCN11AQ9UI33 1791 aa10.58□□□□□ -0.72
PDGFRA-207ENST00000509092 PLCH1Q4KWH8 1693 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 A0A0G2JND7 137 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 CCDC194A0A1B0GVG4 234 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 B2RBV5 119 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 DENRO43583 198 aaKnown RBP10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 CD48P09326 243 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 FGFR1P11362 822 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 ACTN1P12814 892 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 CDH2P19022 906 aaPredicted RBP10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 RPA3P35244 121 aaPredicted RBP10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 PPARGP37231 505 aaPredicted RBP10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 VCPP55072 806 aaKnown RBP10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 CAV1Q03135 178 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 TROAPQ12815 778 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 SLC1A5Q15758 541 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 IFIT1BQ5T764 474 aaKnown RBP10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 SEL1L2Q5TEA6 688 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 LPCAT4Q643R3 524 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 GDPD5Q8WTR4 605 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 SLCO2A1Q92959 643 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 MTBPQ96DY7 904 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 TRIM11Q96F44 468 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 CALML4Q96GE6 196 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 NEURL2Q9BR09 285 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 HGH1Q9BTY7 390 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 ARMT1Q9H993 441 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 ARPP21Q9UBL0 812 aaPredicted RBP10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 PCDHA4Q9UN74 947 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 IGSF9BQ9UPX0 1349 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 ADCY6O43306 1168 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 PEX1O43933 1283 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 CAMTA2O94983 1202 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 TNFAIP8O95379 198 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 CYP2C9P11712 490 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 ZNF12P17014 697 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 NOP14P78316 857 aaKnown RBP10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 IRX4P78413 519 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 PDAP1Q13442 181 aaKnown RBP10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 NCOA4Q13772 614 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 APOFQ13790 326 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 C16orf72Q14CZ0 275 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 MAPK6Q16659 721 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 LRRC36Q1X8D7 754 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 USP41Q3LFD5 358 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 DNAL1Q4LDG9 190 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 TMC7Q7Z402 723 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 NLRX1Q86UT6 975 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 PEX5LQ8IYB4 626 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 AHI1Q8N157 1196 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 ICA1LQ8NDH6 482 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 SLC30A5Q8TAD4 765 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 SCFD1Q8WVM8 642 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 SNF8Q96H20 258 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 ZSCAN10Q96SZ4 725 aaPredicted RBP10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 FBXO6Q9NRD1 293 aaPredicted RBP10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 TBC1D23Q9NUY8 699 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 SLC7A8Q9UHI5 535 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 TTLL3Q9Y4R7 772 aa10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 MYH14Q7Z406 1995 aaKnown RBP10.57□□□□□ -0.72
PDGFRA-207ENST00000509092 DUOX1Q9NRD9 1551 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 H3BRJ5 948 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 ABHD2P08910 425 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 CHRNB2P17787 502 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 CA4P22748 312 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 PEX2P28328 305 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 PHBP35232 272 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 PHKA2P46019 1235 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 NR1H2P55055 460 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 KCNH2Q12809 1159 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 LRRC41Q15345 812 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 KCTD21Q4G0X4 260 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 POTEHQ6S545 545 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 LNX1Q8TBB1 728 aaPredicted RBP10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 TMEM120AQ9BXJ8 343 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 FHDC1Q9C0D6 1143 aaPredicted RBP10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 Q9H521 79 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 RRN3Q9NYV6 651 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 DKK3Q9UBP4 350 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 STK17AQ9UEE5 414 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 RSL24D1Q9UHA3 163 aaKnown RBP10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 DOLKQ9UPQ8 538 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 RIC1Q4ADV7 1423 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 C10orf71Q711Q0 1435 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 A0A1B0GUL6 1792 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 M0R2N6 131 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 FCHO1O14526 889 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 OR52Z1P0C646 297 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 OCM2P0CE71 109 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 OCMP0CE72 109 aaPredicted RBP10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 SLC9A1P19634 815 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms