RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 ALAS1P13196 640 aa3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 SLC6A4P31645 630 aa3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 MAPK10P53779 464 aa3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 SRSF2Q01130 221 aaKnown RBP3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 PWP2Q15269 919 aaKnown RBP3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 SF3B3Q15393 1217 aaKnown RBP3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 TOR2AQ5JU69 321 aa3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 FITM2Q8N6M3 262 aa3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 HASPINQ8TF76 798 aa3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 ZNF48Q96MX3 618 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 GSTO2Q9H4Y5 243 aa3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 TYW1Q9NV66 732 aaKnown RBP3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 CNTNAP2Q9UHC6 1331 aa3.12□□□□□ -1.91
DEPDC1B-204ENST00000509006 TCRBV7S2A1N4TA0A589 114 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 MPPED1O15442 326 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 PEX1O43933 1283 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 GSPT1P15170 499 aaKnown RBP3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 GPD1P21695 349 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 GYS2P54840 703 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 SCAND1P57086 179 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 KLF9Q13886 244 aaPredicted RBP3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 MTX3Q5HYI7 312 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 AMIGO2Q86SJ2 522 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 PEG10Q86TG7 708 aaKnown RBP3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 EXOC8Q8IYI6 725 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 AFAP1L2Q8N4X5 818 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 UBR7Q8N806 425 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 VGLL2Q8N8G2 317 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 DCBLD1Q8N8Z6 715 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 FCRL4Q96PJ5 515 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 ADI1Q9BV57 179 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 PCDH12Q9NPG4 1184 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 CCM2LQ9NUG4 571 aaPredicted RBP3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 C14orf119Q9NWQ9 140 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 BCCIPQ9P287 314 aaKnown RBP eCLIP3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 KLHL42Q9P2K6 505 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 TCEAL9Q9UHQ7 104 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 RUVBL1Q9Y265 456 aaKnown RBP3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 ZNF804BA4D1E1 1349 aa3.11□□□□□ -1.91
DEPDC1B-204ENST00000509006 TRGV11A0A075B6L2 103 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 PRAMEF33A0A0G2JMD5 474 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 CCDC194A0A1B0GVG4 234 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 FAM171A2A8MVW0 826 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 YY2O15391 372 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 BRINP1O60477 761 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 PRAMEF10O60809 474 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 EYA4O95677 639 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 PRKCGP05129 697 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 OSMP13725 252 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 DDCP20711 480 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 SLC5A3P53794 718 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 SSBP2P81877 361 aaPredicted RBP3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 EIF2B5Q13144 721 aaKnown RBP3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 NBPF8Q3BBV2 869 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 KIAA1614Q5VZ46 1190 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 ZNF626Q68DY1 528 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 C11orf87Q6NUJ2 197 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 TMPRSS9Q7Z410 1059 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 SMC5Q8IY18 1101 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 TBC1D15Q8TC07 691 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 CCHCR1Q8TD31 782 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 GPATCH3Q96I76 525 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 TLR10Q9BXR5 811 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 CTTNBP2NLQ9P2B4 639 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 CHPF2Q9P2E5 772 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 PCDHGA2Q9Y5H1 932 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 AOX1Q06278 1338 aa3.1□□□□□ -1.91
DEPDC1B-204ENST00000509006 WDR27A2RRH5 827 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 CCDC151A5D8V7 595 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 ADM5C9JUS6 153 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 PLIN1O60240 522 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 HAUS5O94927 633 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 KCNA2P16389 499 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 GATA3P23771 443 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 PTGER1P34995 402 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 GRIA3P42263 894 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 CTXN1P60606 82 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 ERVK-21P61565 698 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 OS9Q13438 667 aaPredicted RBP3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 FHL1Q13642 323 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 STAT4Q14765 748 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 ETFDHQ16134 617 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 TSTD2Q5T7W7 516 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 KAZNQ674X7 775 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 LHFPL2Q6ZUX7 228 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 TICAM2Q86XR7 235 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 SPATA3Q8NHX4 192 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 SLC30A5Q8TAD4 765 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 TFAP2BQ92481 460 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 LPIN2Q92539 896 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 WACQ9BTA9 647 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 C11orf54Q9H0W9 315 aaPredicted RBP3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 CAAP1Q9H8G2 361 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 MANSC1Q9H8J5 431 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 ZNF277Q9NRM2 450 aaPredicted RBP3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 INTS13Q9NVM9 706 aa3.09□□□□□ -1.91
DEPDC1B-204ENST00000509006 DNAJC28Q9NX36 388 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms