RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 CMASQ8NFW8 434 aaPredicted RBP9.4□□□□□ -0.9
SNCA-211ENST00000508895 ITFG1Q8TB96 612 aa9.4□□□□□ -0.9
SNCA-211ENST00000508895 SMG7Q92540 1137 aaKnown RBP9.4□□□□□ -0.9
SNCA-211ENST00000508895 ASIC4Q96FT7 647 aa9.4□□□□□ -0.9
SNCA-211ENST00000508895 BORCS6Q96GS4 357 aa9.4□□□□□ -0.9
SNCA-211ENST00000508895 UROC1Q96N76 676 aa9.4□□□□□ -0.9
SNCA-211ENST00000508895 RTP3Q9BQQ7 232 aa9.4□□□□□ -0.9
SNCA-211ENST00000508895 RPP25Q9BUL9 199 aaKnown RBP9.4□□□□□ -0.9
SNCA-211ENST00000508895 GZF1Q9H116 711 aaPredicted RBP9.4□□□□□ -0.9
SNCA-211ENST00000508895 RPF1Q9H9Y2 349 aaKnown RBP9.4□□□□□ -0.9
SNCA-211ENST00000508895 TOPORSQ9NS56 1045 aaPredicted RBP9.4□□□□□ -0.9
SNCA-211ENST00000508895 FBXL5Q9UKA1 691 aa9.4□□□□□ -0.9
SNCA-211ENST00000508895 AGO2Q9UKV8 859 aaKnown RBP9.4□□□□□ -0.9
SNCA-211ENST00000508895 FAM50BQ9Y247 325 aa9.4□□□□□ -0.9
SNCA-211ENST00000508895 OBSL1O75147 1896 aa9.4□□□□□ -0.91
SNCA-211ENST00000508895 CACNA1BQ00975 2339 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 DENND4CQ5VZ89 1909 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 ANO9A1A5B4 782 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 CARNS1A5YM72 827 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 GOLGA6L22H0YM25 854 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 M0QZQ0 153 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 PIRO00625 290 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 HCRTO43612 131 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 NARSO43776 548 aaKnown RBP9.39□□□□□ -0.91
SNCA-211ENST00000508895 MTHFRP42898 656 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 ARPP19P56211 112 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 BMS1Q14692 1282 aaKnown RBP9.39□□□□□ -0.91
SNCA-211ENST00000508895 PTPN21Q16825 1174 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 SLC5A9Q2M3M2 681 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 ATAT1Q5SQI0 421 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 SLC8B1Q6J4K2 584 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 CES5AQ6NT32 575 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 GRASPQ7Z6J2 395 aaPredicted RBP9.39□□□□□ -0.91
SNCA-211ENST00000508895 NELFCDQ8IXH7 590 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 GPR65Q8IYL9 337 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 SLC7A14Q8TBB6 771 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 ZNF507Q8TCN5 953 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 PLEKHO2Q8TD55 490 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 POMGNT1Q8WZA1 660 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 EDAQ92838 391 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 ELMO3Q96BJ8 720 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 CCDC34Q96HJ3 373 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 ACCSQ96QU6 501 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 FAM213AQ9BRX8 229 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 PRKD2Q9BZL6 878 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 CLSTN2Q9H4D0 955 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 PLEKHA5Q9HAU0 1116 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 PDE11AQ9HCR9 933 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 WDR6Q9NNW5 1121 aaKnown RBP9.39□□□□□ -0.91
SNCA-211ENST00000508895 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.39□□□□□ -0.91
SNCA-211ENST00000508895 DNMT3BQ9UBC3 853 aaKnown RBP9.39□□□□□ -0.91
SNCA-211ENST00000508895 PCDHB13Q9Y5F0 798 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 PCDHA5Q9Y5H7 936 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 BACE2Q9Y5Z0 518 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 ZNF638Q14966 1978 aaKnown RBP9.39□□□□□ -0.91
SNCA-211ENST00000508895 GREB1Q4ZG55 1949 aa9.39□□□□□ -0.91
SNCA-211ENST00000508895 NCANO14594 1321 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 CLUHO75153 1309 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 FSD2A1L4K1 749 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 TMEM221A6NGB7 291 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 M0R296 226 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 CLIC2O15247 247 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 SOAT2O75908 522 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 ABLIM3O94929 683 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 C8AP07357 584 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 SRGAP2BP0DMP2 458 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 BMP6P22004 513 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 RPL9P32969 192 aaKnown RBP9.38□□□□□ -0.91
SNCA-211ENST00000508895 MCM4P33991 863 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 CCR2P41597 374 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 VCPP55072 806 aaKnown RBP9.38□□□□□ -0.91
SNCA-211ENST00000508895 LILRA4P59901 499 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 PPP2R3AQ06190 1150 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 PSMD2Q13200 908 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 CAMK4Q16566 473 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 RNF19BQ6ZMZ0 732 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 C15orf39Q6ZRI6 1047 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 TRIM67Q6ZTA4 783 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 STXBP4Q6ZWJ1 553 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 APBB1IPQ7Z5R6 666 aaPredicted RBP9.38□□□□□ -0.91
SNCA-211ENST00000508895 CBWD2Q8IUF1 395 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 OR5B17Q8NGF7 314 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 OR10T2Q8NGX3 314 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 SMARCE1Q969G3 411 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 TCEAL4Q96EI5 215 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 SENP8Q96LD8 212 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 RIPOR3Q96MK2 946 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 GSDMAQ96QA5 445 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 POP1Q99575 1024 aaKnown RBP9.38□□□□□ -0.91
SNCA-211ENST00000508895 KCTD10Q9H3F6 313 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 SLC38A7Q9NVC3 462 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 SIX4Q9UIU6 781 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 HOOK1Q9UJC3 728 aaKnown RBP9.38□□□□□ -0.91
SNCA-211ENST00000508895 MAN1B1Q9UKM7 699 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 UBQLN1Q9UMX0 589 aaKnown RBP9.38□□□□□ -0.91
SNCA-211ENST00000508895 PCDHB8Q9UN66 801 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 EXOC7Q9UPT5 735 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 SSX2IPQ9Y2D8 614 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 PATJQ8NI35 1801 aa9.38□□□□□ -0.91
SNCA-211ENST00000508895 DCHS1Q96JQ0 3298 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms