RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 BTN3A1O00481 513 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 TBC1D4O60343 1298 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 ABHD16AO95870 558 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 TSHRP16473 764 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 MGAT1P26572 445 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 FOXL1Q12952 345 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 SLC13A2Q13183 592 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 CSRP2Q16527 193 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 C3orf38Q5JPI3 329 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 METTL24Q5JXM2 366 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 TCTN3Q6NUS6 607 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 DRICH1Q6PGQ1 229 aaPredicted RBP8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 SKAP1Q86WV1 359 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 LIX1LQ8IVB5 337 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 FUKQ8N0W3 1084 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 D2HGDHQ8N465 521 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 CCDC33Q8N5R6 958 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 MB21D1Q8N884 522 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 OR52N2Q8NGI0 321 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 NMD3Q96D46 503 aaKnown RBP8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 KCNC2Q96PR1 638 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 GPR35Q9HC97 309 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 POGKQ9P215 609 aa8.11□□□□□ -1.11
COL6A4P1-204ENST00000508169 F8W8V4 182 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 NCK2O43639 380 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 AGFG2O95081 481 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 PLATP00750 562 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 ITGB1P05556 798 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 PARP1P09874 1014 aaKnown RBP8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 ZSCAN22P10073 491 aaPredicted RBP8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 SLC6A2P23975 617 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 STK3Q13188 491 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 GRAMD1BQ3KR37 738 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 TBC1D10BQ4KMP7 808 aaPredicted RBP8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 SLC44A4Q53GD3 710 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 FAM209BQ5JX69 171 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 OR10H5Q8NGA6 315 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 TBC1D15Q8TC07 691 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 MAML1Q92585 1016 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 DDX17Q92841 729 aaKnown RBP8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 SCAMP4Q969E2 229 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 SELENOOQ9BVL4 669 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 CERS4Q9HA82 394 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 SMURF2Q9HAU4 748 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 COL20A1Q9P218 1284 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 PAXBP1Q9Y5B6 917 aa8.1□□□□□ -1.11
COL6A4P1-204ENST00000508169 TRIM43BA6NCK2 446 aa8.09□□□□□ -1.11
COL6A4P1-204ENST00000508169 UNC5CO95185 931 aa8.09□□□□□ -1.11
COL6A4P1-204ENST00000508169 THP07101 528 aa8.09□□□□□ -1.11
COL6A4P1-204ENST00000508169 HK1P19367 917 aa8.09□□□□□ -1.11
COL6A4P1-204ENST00000508169 ZNF135P52742 658 aaPredicted RBP8.09□□□□□ -1.11
COL6A4P1-204ENST00000508169 RPS16P62249 146 aaKnown RBP8.09□□□□□ -1.11
COL6A4P1-204ENST00000508169 CHAF1AQ13111 956 aaPredicted RBP8.09□□□□□ -1.11
COL6A4P1-204ENST00000508169 DGKKQ5KSL6 1271 aa8.09□□□□□ -1.11
COL6A4P1-204ENST00000508169 IZUMO3Q5VZ72 239 aa8.09□□□□□ -1.11
COL6A4P1-204ENST00000508169 LMBRD2Q68DH5 695 aaPredicted RBP8.09□□□□□ -1.11
COL6A4P1-204ENST00000508169 MED25Q71SY5 747 aa8.09□□□□□ -1.11
COL6A4P1-204ENST00000508169 CIR1Q86X95 450 aaPredicted RBP8.09□□□□□ -1.11
COL6A4P1-204ENST00000508169 TMIEQ8NEW7 156 aa8.09□□□□□ -1.11
COL6A4P1-204ENST00000508169 TRIM43Q96BQ3 446 aaPredicted RBP8.09□□□□□ -1.11
COL6A4P1-204ENST00000508169 ARFGAP3Q9NP61 516 aa8.09□□□□□ -1.11
COL6A4P1-204ENST00000508169 GPRC5BQ9NZH0 403 aa8.09□□□□□ -1.11
COL6A4P1-204ENST00000508169 WIZO95785 1651 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 DRGXA6NNA5 263 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 FOXS1O43638 330 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 CHEK2O96017 543 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 MXRA7P84157 204 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 RAB32Q13637 225 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 DCAF17Q5H9S7 520 aaPredicted RBP8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 CRB2Q5IJ48 1285 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 FAM83BQ5T0W9 1011 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 POLNQ7Z5Q5 900 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 ANKRD35Q8N283 1001 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 SLC17A8Q8NDX2 589 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 KIAA1191Q96A73 305 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 MIEF2Q96C03 454 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 PHACTR3Q96KR7 559 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 KLHL32Q96NJ5 620 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 COLEC11Q9BWP8 271 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 BRIP1Q9BX63 1249 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 TINAGL1Q9GZM7 467 aaPredicted RBP8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 SIK2Q9H0K1 926 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 VPS11Q9H270 941 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 PTPRHQ9HD43 1115 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 PLEKHM1Q9Y4G2 1056 aa8.08□□□□□ -1.12
COL6A4P1-204ENST00000508169 SMARCA2P51531 1590 aa8.07□□□□□ -1.12
COL6A4P1-204ENST00000508169 OTOL1A6NHN0 477 aaPredicted RBP8.07□□□□□ -1.12
COL6A4P1-204ENST00000508169 F5H423 210 aaPredicted RBP8.07□□□□□ -1.12
COL6A4P1-204ENST00000508169 M0QYG6 137 aa8.07□□□□□ -1.12
COL6A4P1-204ENST00000508169 GPR42O15529 346 aa8.07□□□□□ -1.12
COL6A4P1-204ENST00000508169 DNAJB5O75953 348 aa8.07□□□□□ -1.12
COL6A4P1-204ENST00000508169 CHN2P52757 468 aa8.07□□□□□ -1.12
COL6A4P1-204ENST00000508169 POU6F2P78424 691 aaPredicted RBP8.07□□□□□ -1.12
COL6A4P1-204ENST00000508169 HHEXQ03014 270 aa8.07□□□□□ -1.12
COL6A4P1-204ENST00000508169 CTBP1Q13363 440 aa8.07□□□□□ -1.12
COL6A4P1-204ENST00000508169 UBXN11Q5T124 520 aa8.07□□□□□ -1.12
COL6A4P1-204ENST00000508169 ZFYVE27Q5T4F4 411 aa8.07□□□□□ -1.12
COL6A4P1-204ENST00000508169 TSHZ1Q6ZSZ6 1077 aa8.07□□□□□ -1.12
COL6A4P1-204ENST00000508169 USP37Q86T82 979 aa8.07□□□□□ -1.12
COL6A4P1-204ENST00000508169 RNF152Q8N8N0 203 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms