RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 CISHQ9NSE2 258 aa18.82■□□□□ 0.6
SFXN1-208ENST00000507823 UTP11Q9Y3A2 253 aaKnown RBP18.82■□□□□ 0.6
SFXN1-208ENST00000507823 A0A087WZ62 844 aa18.82■□□□□ 0.6
SFXN1-208ENST00000507823 H3BRB1 525 aa18.82■□□□□ 0.6
SFXN1-208ENST00000507823 FSCN2O14926 492 aa18.82■□□□□ 0.6
SFXN1-208ENST00000507823 OPA1O60313 960 aa18.82■□□□□ 0.6
SFXN1-208ENST00000507823 TMEM191BP0C7N4 346 aa18.82■□□□□ 0.6
SFXN1-208ENST00000507823 MMP8P22894 467 aa18.82■□□□□ 0.6
SFXN1-208ENST00000507823 TMOD1P28289 359 aa18.82■□□□□ 0.6
SFXN1-208ENST00000507823 MAN1A1P33908 653 aa18.82■□□□□ 0.6
SFXN1-208ENST00000507823 MAMLD1Q13495 774 aa18.82■□□□□ 0.6
SFXN1-208ENST00000507823 C2orf69Q8N8R5 385 aa18.82■□□□□ 0.6
SFXN1-208ENST00000507823 RIN2Q8WYP3 895 aaPredicted RBP18.82■□□□□ 0.6
SFXN1-208ENST00000507823 FDXACB1Q9BRP7 624 aaPredicted RBP18.82■□□□□ 0.6
SFXN1-208ENST00000507823 CELF4Q9BZC1 486 aaKnown RBP18.82■□□□□ 0.6
SFXN1-208ENST00000507823 ZNF518BQ9C0D4 1074 aa18.82■□□□□ 0.6
SFXN1-208ENST00000507823 TUT1Q9H6E5 874 aaKnown RBP18.82■□□□□ 0.6
SFXN1-208ENST00000507823 VRTNQ9H8Y1 702 aa18.82■□□□□ 0.6
SFXN1-208ENST00000507823 ADAM22Q9P0K1 906 aa18.82■□□□□ 0.6
SFXN1-208ENST00000507823 SCINQ9Y6U3 715 aa18.82■□□□□ 0.6
SFXN1-208ENST00000507823 GOLGA8KD6RF30 607 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 MMP3P08254 477 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 GYS2P54840 703 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 TFAMQ00059 246 aaKnown RBP18.81■□□□□ 0.6
SFXN1-208ENST00000507823 DR1Q01658 176 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 TRPC3Q13507 836 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 MARCH8Q5T0T0 291 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 DPP9Q86TI2 863 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 ZIM3Q96PE6 472 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 ERP44Q9BS26 406 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 BCO2Q9BYV7 579 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 NEUROG2Q9H2A3 272 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 ASB7Q9H672 318 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 SIX4Q9UIU6 781 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 TCRBV5S1A1TA0A578 114 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 ZNF286BP0CG31 522 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 YWHAEP62258 255 aaKnown RBP18.81■□□□□ 0.6
SFXN1-208ENST00000507823 IGBP1P78318 339 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 ACVR2BQ13705 512 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 ZNF699Q32M78 642 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 TRIM7Q9C029 511 aa18.81■□□□□ 0.6
SFXN1-208ENST00000507823 MYO1FO00160 1098 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 DAPK3O43293 454 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 ZEB2O60315 1214 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 STAG3L1P0CL83 205 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 CXCL8P10145 99 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 TMEM192Q8IY95 271 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 SLCO2A1Q92959 643 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 ZNF668Q96K58 619 aaPredicted RBP18.8■□□□□ 0.6
SFXN1-208ENST00000507823 PLVAPQ9BX97 442 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 LCMT1Q9UIC8 334 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 FNTAP49354 379 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 MKRN3Q13064 507 aaKnown RBP18.8■□□□□ 0.6
SFXN1-208ENST00000507823 SPDYCQ5MJ68 293 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 ZNF410Q86VK4 478 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 DDX42Q86XP3 938 aaKnown RBP eCLIP18.8■□□□□ 0.6
SFXN1-208ENST00000507823 JAMLQ86YT9 394 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 NPLOC4Q8TAT6 608 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 LRRC45Q96CN5 670 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 FAM212AQ96EL1 285 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 DDX27Q96GQ7 796 aaKnown RBP18.8■□□□□ 0.6
SFXN1-208ENST00000507823 C11orf70Q9BRQ4 267 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 LRRC19Q9H756 370 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 FAM204AQ9H8W3 233 aa18.8■□□□□ 0.6
SFXN1-208ENST00000507823 GUCY2FP51841 1108 aa18.79■□□□□ 0.6
SFXN1-208ENST00000507823 CFAP58Q5T655 872 aa18.79■□□□□ 0.6
SFXN1-208ENST00000507823 LRIG3Q6UXM1 1119 aa18.79■□□□□ 0.6
SFXN1-208ENST00000507823 TXLNGYQ9BZA5 131 aa18.79■□□□□ 0.6
SFXN1-208ENST00000507823 FAM124BQ9H5Z6 455 aaPredicted RBP18.79■□□□□ 0.6
SFXN1-208ENST00000507823 ZDHHC18Q9NUE0 388 aa18.79■□□□□ 0.6
SFXN1-208ENST00000507823 MTUS1Q9ULD2 1270 aa18.79■□□□□ 0.6
SFXN1-208ENST00000507823 LACTBL1A8MY62 500 aa18.79■□□□□ 0.6
SFXN1-208ENST00000507823 PSTPIP1O43586 416 aa18.79■□□□□ 0.6
SFXN1-208ENST00000507823 ARF4P18085 180 aaPredicted RBP18.79■□□□□ 0.6
SFXN1-208ENST00000507823 EIF4BP23588 611 aaKnown RBP18.79■□□□□ 0.6
SFXN1-208ENST00000507823 PPFIA1Q13136 1202 aa18.79■□□□□ 0.6
SFXN1-208ENST00000507823 HLTFQ14527 1009 aaKnown RBP eCLIP18.79■□□□□ 0.62e-6■■■■□ 23.7
SFXN1-208ENST00000507823 GRIK4Q16099 956 aa18.79■□□□□ 0.6
SFXN1-208ENST00000507823 MORN1Q5T089 497 aa18.79■□□□□ 0.6
SFXN1-208ENST00000507823 MMS22LQ6ZRQ5 1243 aa18.79■□□□□ 0.6
SFXN1-208ENST00000507823 PASD1Q8IV76 773 aa18.79■□□□□ 0.6
SFXN1-208ENST00000507823 C1orf127Q8N9H9 656 aa18.79■□□□□ 0.6
SFXN1-208ENST00000507823 PARVAQ9NVD7 372 aa18.79■□□□□ 0.6
SFXN1-208ENST00000507823 AKT3Q9Y243 479 aa18.79■□□□□ 0.6
SFXN1-208ENST00000507823 PODXLO00592 558 aa18.78■□□□□ 0.6
SFXN1-208ENST00000507823 CALB1P05937 261 aa18.78■□□□□ 0.6
SFXN1-208ENST00000507823 RARAP10276 462 aa18.78■□□□□ 0.6
SFXN1-208ENST00000507823 ATICP31939 592 aa18.78■□□□□ 0.6
SFXN1-208ENST00000507823 DGKDQ16760 1214 aa18.78■□□□□ 0.6
SFXN1-208ENST00000507823 TTC27Q6P3X3 843 aa18.78■□□□□ 0.6
SFXN1-208ENST00000507823 ZNF771Q7L3S4 317 aaPredicted RBP18.78■□□□□ 0.6
SFXN1-208ENST00000507823 KIAA0319LQ8IZA0 1049 aa18.78■□□□□ 0.6
SFXN1-208ENST00000507823 TRIM51Q9BSJ1 452 aa18.78■□□□□ 0.6
SFXN1-208ENST00000507823 TSPAN1O60635 241 aa18.78■□□□□ 0.6
SFXN1-208ENST00000507823 CELF2O95319 508 aaKnown RBP18.78■□□□□ 0.6
SFXN1-208ENST00000507823 STAU1O95793 577 aaKnown RBP18.78■□□□□ 0.6
SFXN1-208ENST00000507823 NFICP08651 508 aa18.78■□□□□ 0.6
SFXN1-208ENST00000507823 GBP1P32455 592 aa18.78■□□□□ 0.6
SFXN1-208ENST00000507823 LLGL2Q6P1M3 1020 aa18.78■□□□□ 0.6
SFXN1-208ENST00000507823 CDR2LQ86X02 465 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms