RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, human

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG4-204	ENST00000507197	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.97	□□□□□ -0.17
SNHG4-204	ENST00000507197		K7ENM7	598 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	MEFV	O15553	781 aa	Predicted RBP	13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	TBCA	O75347	108 aa	Known RBP	13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	PIGR	P01833	764 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	MYL4	P12829	197 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	TYMP	P19971	482 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	CD72	P21854	359 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	LONP1	P36776	959 aa	Known RBP	13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	ALDH1A3	P47895	512 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	AARS	P49588	968 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	EPHB3	P54753	998 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	EPHA5	P54756	1037 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	GPR17	Q13304	367 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	MYBPC2	Q14324	1141 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	ZBTB6	Q15916	424 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	C1orf228	Q6PIY5	440 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	GPBP1	Q86WP2	473 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	BEST2	Q8NFU1	509 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	SECISBP2L	Q93073	1101 aa	Known RBP	13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	TCEAL4	Q96EI5	215 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	MSANTD3	Q96H12	275 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	REEP2	Q9BRK0	252 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	PLA2G2F	Q9BZM2	168 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	SLITRK6	Q9H5Y7	841 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	HEBP1	Q9NRV9	189 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	TBX20	Q9UMR3	447 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	MTF2	Q9Y483	593 aa	Predicted RBP	13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	ASB3	Q9Y575	518 aa		13.96	□□□□□ -0.17
SNHG4-204	ENST00000507197	MYH15	Q9Y2K3	1946 aa		13.96	□□□□□ -0.18
SNHG4-204	ENST00000507197	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	LACTBL1	A8MY62	500 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	TRAK2	O60296	914 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	FGF19	O95750	216 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	ODC1	P11926	461 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	FCAR	P24071	287 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	TARS	P26639	723 aa	Known RBP	13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	CCR2	P41597	374 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	ZNF131	P52739	623 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	CACNB1	Q02641	598 aa	Predicted RBP	13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	CSTF1	Q05048	431 aa	Known RBP	13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	SPAG1	Q07617	926 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	ARSH	Q5FYA8	562 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	LARP1B	Q659C4	914 aa	Known RBP	13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	OVOS1	Q6IE37	1185 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	ARMCX5	Q6P1M9	558 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	RNF19B	Q6ZMZ0	732 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	BRAP	Q7Z569	592 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	KIAA2013	Q8IYS2	634 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	GPR161	Q8N6U8	529 aa	Known RBP	13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	MSTO1	Q9BUK6	570 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	TRPV4	Q9HBA0	871 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	ZSCAN32	Q9NX65	697 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	CEP72	Q9P209	647 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	HSFX1	Q9UBD0	423 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	DERA	Q9Y315	318 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	YIPF1	Q9Y548	306 aa		13.95	□□□□□ -0.18
SNHG4-204	ENST00000507197	ZNF263	O14978	683 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	CENPB	P07199	599 aa	Predicted RBP	13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	ADRB2	P07550	413 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	GDI1	P31150	447 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	TNFSF9	P41273	254 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	NRL	P54845	237 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	MLLT6	P55198	1093 aa	Predicted RBP	13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	GRM2	Q14416	872 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	DHX8	Q14562	1220 aa	Known RBP	13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	ENOX2	Q16206	610 aa	Known RBP	13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	SPATA1	Q5VX52	437 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	SLFN12L	Q6IEE8	588 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	MAMSTR	Q6ZN01	415 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	ITIH5	Q86UX2	942 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	MAP4K3	Q8IVH8	894 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	MFSD6L	Q8IWD5	586 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	YAF2	Q8IY57	180 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	HS6ST3	Q8IZP7	471 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	SUMF1	Q8NBK3	374 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	FAM212A	Q96EL1	285 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	HAPLN2	Q9GZV7	340 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	ZHX3	Q9H4I2	956 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	NCDN	Q9UBB6	729 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	DSE	Q9UL01	958 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197	GVINP1	Q7Z2Y8	2422 aa		13.94	□□□□□ -0.18
SNHG4-204	ENST00000507197		A0A0B4J269	797 aa		13.93	□□□□□ -0.18
SNHG4-204	ENST00000507197	LILRA4	P59901	499 aa		13.93	□□□□□ -0.18
SNHG4-204	ENST00000507197	GTF2B	Q00403	316 aa		13.93	□□□□□ -0.18
SNHG4-204	ENST00000507197	POU5F1	Q01860	360 aa	Known RBP	13.93	□□□□□ -0.18
SNHG4-204	ENST00000507197	DUSP4	Q13115	394 aa		13.93	□□□□□ -0.18
SNHG4-204	ENST00000507197	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
SNHG4-204	ENST00000507197	VIT	Q6UXI7	678 aa		13.93	□□□□□ -0.18
SNHG4-204	ENST00000507197	KRI1	Q8N9T8	703 aa	Known RBP	13.93	□□□□□ -0.18
SNHG4-204	ENST00000507197	ZBTB44	Q8NCP5	570 aa		13.93	□□□□□ -0.18
SNHG4-204	ENST00000507197	CSGALNACT1	Q8TDX6	532 aa		13.93	□□□□□ -0.18
SNHG4-204	ENST00000507197	FAM3C	Q92520	227 aa		13.93	□□□□□ -0.18
SNHG4-204	ENST00000507197	LARP4B	Q92615	738 aa	Known RBP	13.93	□□□□□ -0.18
SNHG4-204	ENST00000507197	RAD54L	Q92698	747 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms