RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 ALOXE3Q9BYJ1 711 aa4.47□□□□□ -1.69
CDC42SE2-210ENST00000506929 MRPL46Q9H2W6 279 aaKnown RBP4.47□□□□□ -1.69
CDC42SE2-210ENST00000506929 GABBR1Q9UBS5 961 aa4.47□□□□□ -1.69
CDC42SE2-210ENST00000506929 PNMA8BQ9ULN7 279 aaPredicted RBP4.47□□□□□ -1.69
CDC42SE2-210ENST00000506929 PCDHA6Q9UN73 950 aa4.47□□□□□ -1.69
CDC42SE2-210ENST00000506929 COL4A3Q01955 1670 aa4.47□□□□□ -1.69
CDC42SE2-210ENST00000506929 ZNF785A8K8V0 405 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 H3BUI4 141 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 UBXN7O94888 489 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 GPANK1O95872 356 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 GJB1P08034 283 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 ALAS1P13196 640 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 DDX6P26196 483 aaKnown RBP eCLIP4.46□□□□□ -1.74e-6■■■■□ 24.4
CDC42SE2-210ENST00000506929 PTGS2P35354 604 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 ZEB1P37275 1124 aaPredicted RBP4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 EXOSC9Q06265 439 aaKnown RBP4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 DPTQ07507 201 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 BOP1Q14137 746 aaKnown RBP4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 LLGL1Q15334 1064 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 CYP2A13Q16696 494 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 FAM102BQ5T8I3 360 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 SWSAP1Q6NVH7 229 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 KCNV1Q6PIU1 500 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 SLC30A10Q6XR72 485 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 KLHDC4Q8TBB5 520 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 NUP133Q8WUM0 1156 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 RUNDC1Q96C34 613 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 SMOC2Q9H3U7 446 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 SERHL2Q9H4I8 314 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 PNPOQ9NVS9 261 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 CTTNBP2NLQ9P2B4 639 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 SALL3Q9BXA9 1300 aa4.46□□□□□ -1.7
CDC42SE2-210ENST00000506929 E2F8A0AVK6 867 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 GRID2IPA4D2P6 1211 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 DIRC3C9JPN6 131 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 DTNBO60941 627 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 VPS4BO75351 444 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 ABHD16AO95870 558 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 CHRM3P20309 590 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 HTR1BP28222 390 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 PLA2G5P39877 138 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 FSTL1Q12841 308 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 MLC1Q15049 377 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 CCDC157Q569K6 752 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 LDLRAD3Q86YD5 345 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 FMNL3Q8IVF7 1028 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 CFAP52Q8N1V2 620 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 CAMKK1Q8N5S9 505 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 PCSK9Q8NBP7 692 aaKnown RBP4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 BEND2Q8NDZ0 799 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 NLGN4YQ8NFZ3 816 aaPredicted RBP4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 GPR150Q8NGU9 434 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 C1GALT1C1Q96EU7 318 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 SLC35A4Q96G79 324 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 AIFM3Q96NN9 605 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 RNPEPQ9H4A4 650 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 CPA4Q9UI42 421 aa4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 MTO1Q9Y2Z2 717 aaKnown RBP4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 WDR33Q9C0J8 1336 aaKnown RBP4.45□□□□□ -1.7
CDC42SE2-210ENST00000506929 GAGE12BA1L429 117 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 GAGE12HA6NDE8 117 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 SUV39H1O43463 412 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 B3GALT2O43825 422 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 PPFIA4O75335 1185 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 ERN1O75460 977 aaKnown RBP4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 SUN1O94901 812 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 KIF20AO95235 890 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 PARNO95453 639 aaKnown RBP4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 HSPA6P17066 643 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 PIK3CGP48736 1102 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 TOB1P50616 345 aaPredicted RBP4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 ZNF135P52742 658 aaPredicted RBP4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 INHBCP55103 352 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 GALEQ14376 348 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 CD300EQ496F6 205 aaPredicted RBP4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 DENND1CQ8IV53 801 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 ARHGEF19Q8IW93 802 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 SYNE4Q8N205 404 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 MAGEB6Q8N7X4 407 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 CAMKK2Q96RR4 588 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 PNKPQ96T60 521 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 SLITRK6Q9H5Y7 841 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 BRD9Q9H8M2 597 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 UNKLQ9H9P5 680 aaKnown RBP4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 ATP6V0A4Q9HBG4 840 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 NMRK2Q9NPI5 230 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 POLHQ9Y253 713 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 STXBP5LQ9Y2K9 1186 aa4.44□□□□□ -1.7
CDC42SE2-210ENST00000506929 SLC16A6O15403 523 aa4.43□□□□□ -1.7
CDC42SE2-210ENST00000506929 CTNND1O60716 968 aaKnown RBP4.43□□□□□ -1.7
CDC42SE2-210ENST00000506929 CDKL5O76039 1030 aa4.43□□□□□ -1.7
CDC42SE2-210ENST00000506929 SPATA31D3P0C874 917 aa4.43□□□□□ -1.7
CDC42SE2-210ENST00000506929 ITGAMP11215 1152 aa4.43□□□□□ -1.7
CDC42SE2-210ENST00000506929 VCAM1P19320 739 aa4.43□□□□□ -1.7
CDC42SE2-210ENST00000506929 GATA3P23771 443 aa4.43□□□□□ -1.7
CDC42SE2-210ENST00000506929 BMPR1AP36894 532 aa4.43□□□□□ -1.7
CDC42SE2-210ENST00000506929 RAB1AP62820 205 aa4.43□□□□□ -1.7
CDC42SE2-210ENST00000506929 PURAQ00577 322 aaKnown RBP4.43□□□□□ -1.7
CDC42SE2-210ENST00000506929 GUCY1B3Q02153 619 aa4.43□□□□□ -1.7
CDC42SE2-210ENST00000506929 FOXI1Q12951 378 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms