RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 PALB2Q86YC2 1186 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 IFNLR1Q8IU57 520 aaPredicted RBP11.67□□□□□ -0.54
CPNE4-206ENST00000505957 CSGALNACT2Q8N6G5 542 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 PJA1Q8NG27 643 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 CEP63Q96MT8 703 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 TSG101Q99816 390 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 EIF2AQ9BY44 585 aaKnown RBP11.67□□□□□ -0.54
CPNE4-206ENST00000505957 RNF39Q9H2S5 420 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 MIOSQ9NXC5 875 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 WRAP73Q9P2S5 460 aaPredicted RBP11.67□□□□□ -0.54
CPNE4-206ENST00000505957 NUMBLQ9Y6R0 609 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 OTOGLQ3ZCN5 2332 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 ZMYM2Q9UBW7 1377 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 A0A1W2PQC6 194 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 ARHGEF35A5YM69 484 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 TSPAN1O60635 241 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 TBCAO75347 108 aaKnown RBP11.66□□□□□ -0.54
CPNE4-206ENST00000505957 ZMYND10O75800 440 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 SPATA31D3P0C874 917 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 YWHABP31946 246 aaKnown RBP11.66□□□□□ -0.54
CPNE4-206ENST00000505957 RARRES1P49788 294 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 SCNN1GP51170 649 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 ALCAMQ13740 583 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 TRIM14Q14142 442 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 EMC2Q15006 297 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 ZNF528Q3MIS6 628 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 SPECC1LQ69YQ0 1117 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 ANKRD40Q6AI12 368 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 FUT10Q6P4F1 479 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 SPATA31D4Q6ZUB0 917 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 GET4Q7L5D6 327 aaPredicted RBP11.66□□□□□ -0.54
CPNE4-206ENST00000505957 LRRC8AQ8IWT6 810 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 HACE1Q8IYU2 909 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 SUMF1Q8NBK3 374 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 GSTCDQ8NEC7 633 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 CCDC112Q8NEF3 446 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 SCFD1Q8WVM8 642 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 DDX23Q9BUQ8 820 aaKnown RBP11.66□□□□□ -0.54
CPNE4-206ENST00000505957 SRRTQ9BXP5 876 aaKnown RBP11.66□□□□□ -0.54
CPNE4-206ENST00000505957 GPR62Q9BZJ7 368 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 KCTD10Q9H3F6 313 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 PARVGQ9HBI0 331 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 MAGEC2Q9UBF1 373 aaPredicted RBP11.66□□□□□ -0.54
CPNE4-206ENST00000505957 ADAM28Q9UKQ2 775 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 MAPK8IP1Q9UQF2 711 aa11.66□□□□□ -0.54
CPNE4-206ENST00000505957 LGALS16A8MUM7 142 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 F8W810 466 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 NRDCO43847 1150 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 FAM13AO94988 1023 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 GNA14O95837 355 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 HNRNPA1P09651 372 aaKnown RBP eCLIP11.65□□□□□ -0.54
CPNE4-206ENST00000505957 MYBP10242 640 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 PRKCSHP14314 528 aaPredicted RBP11.65□□□□□ -0.54
CPNE4-206ENST00000505957 GLULP15104 373 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 FSHRP23945 695 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 MARSP56192 900 aaKnown RBP11.65□□□□□ -0.54
CPNE4-206ENST00000505957 FKBP3Q00688 224 aaKnown RBP11.65□□□□□ -0.54
CPNE4-206ENST00000505957 TFDP1Q14186 410 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 FILIP1Q7Z7B0 1213 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 SFR1Q86XK3 245 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 MAML2Q8IZL2 1156 aaPredicted RBP11.65□□□□□ -0.54
CPNE4-206ENST00000505957 KIAA1524Q8TCG1 905 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 ZNF507Q8TCN5 953 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 PIGOQ8TEQ8 1089 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 CACTINQ8WUQ7 758 aaKnown RBP11.65□□□□□ -0.54
CPNE4-206ENST00000505957 TMEM174Q8WUU8 243 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 KCNN1Q92952 543 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 HPS3Q969F9 1004 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 ZFP42Q96MM3 310 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 FIZ1Q96SL8 496 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 HINFPQ9BQA5 517 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 NFKBIZQ9BYH8 718 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 OSBPL6Q9BZF3 934 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 KCND1Q9NSA2 647 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 FBXO4Q9UKT5 387 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 CDH7Q9ULB5 785 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 TRAF3IP3Q9Y228 551 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 HES2Q9Y543 173 aa11.65□□□□□ -0.54
CPNE4-206ENST00000505957 DOCK8Q8NF50 2099 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 CEP250Q9BV73 2442 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 NPHP3-ACAD11A0A0J9YXS1 232 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 KANSL1LA0AUZ9 987 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 PDXKO00764 312 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 SPTLC1O15269 473 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 TPM2P07951 284 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 POU2F2P09086 479 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 SDHBP21912 280 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 HOXA9P31269 272 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 MAGEA9P43362 315 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 GPC5P78333 572 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 CCZ1BP86790 482 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 CCZ1P86791 482 aaPredicted RBP11.64□□□□□ -0.55
CPNE4-206ENST00000505957 PRKCQQ04759 706 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 MBTD1Q05BQ5 628 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 GRIK3Q13003 919 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 MAPK7Q13164 816 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 AMHR2Q16671 573 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 XKR9Q5GH70 373 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 ARMCX5Q6P1M9 558 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 PARM1Q6UWI2 310 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms