RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 KMT5BQ4FZB7 885 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 LIN9Q5TKA1 542 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 C9orf57Q5W0N0 161 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 SLC8B1Q6J4K2 584 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 RSPO2Q6UXX9 243 aaPredicted RBP12.35□□□□□ -0.43
KDM3B-203ENST00000505756 HS2ST1Q7LGA3 356 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 EFCAB13Q8IY85 973 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 TMEM130Q8N3G9 435 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 TRIML1Q8N9V2 468 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 ZSWIM2Q8NEG5 633 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 KHSRPQ92945 711 aaKnown RBP eCLIP12.35□□□□□ -0.43
KDM3B-203ENST00000505756 KIAA1586Q9HCI6 787 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 AGPAT3Q9NRZ7 376 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 DPP3Q9NY33 737 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 HSPBP1Q9NZL4 362 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 CGNQ9P2M7 1197 aaKnown RBP12.35□□□□□ -0.43
KDM3B-203ENST00000505756 NR2E1Q9Y466 385 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 ARHGEF37A1IGU5 675 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 SYCE3A1L190 88 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 GOLGA8IPA6NC78 632 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 GOLGA8JA6NMD2 632 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 PI4K2BG5E9Z4 385 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 PPEF2O14830 753 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 TBC1D4O60343 1298 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 RFPL2O75678 378 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 ZMYND10O75800 440 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 CAVIN2O95810 425 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 RPN1P04843 607 aaKnown RBP12.34□□□□□ -0.43
KDM3B-203ENST00000505756 ALADP13716 330 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 LILRA4P59901 499 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 YWHAHQ04917 246 aaPredicted RBP12.34□□□□□ -0.43
KDM3B-203ENST00000505756 DPYDQ12882 1025 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 KNOP1Q1ED39 458 aaKnown RBP12.34□□□□□ -0.43
KDM3B-203ENST00000505756 ZNF280DQ6N043 979 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 DSTYKQ6XUX3 929 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 RTL10Q7L3V2 364 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 NELFCDQ8IXH7 590 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 ZNF461Q8TAF7 563 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 GOLGA5Q8TBA6 731 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 NOC3LQ8WTT2 800 aaKnown RBP12.34□□□□□ -0.43
KDM3B-203ENST00000505756 CACTINQ8WUQ7 758 aaKnown RBP12.34□□□□□ -0.43
KDM3B-203ENST00000505756 CCDC47Q96A33 483 aaKnown RBP12.34□□□□□ -0.43
KDM3B-203ENST00000505756 OXCT2Q9BYC2 517 aaPredicted RBP12.34□□□□□ -0.43
KDM3B-203ENST00000505756 PRKD2Q9BZL6 878 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 FBXL5Q9UKA1 691 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 USTQ9Y2C2 406 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 ANK1P16157 1881 aa12.34□□□□□ -0.43
KDM3B-203ENST00000505756 ZNF233A6NK53 670 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 DCXO43602 365 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 OAZ2O95190 189 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 C8AP07357 584 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 HNRNPA1P09651 372 aaKnown RBP eCLIP12.33□□□□□ -0.44
KDM3B-203ENST00000505756 PRR29P0C7W0 189 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 ODC1P11926 461 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 TYMPP19971 482 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 HOXA9P31269 272 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 TAF6P49848 677 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 WNT7BP56706 349 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 TFAMQ00059 246 aaKnown RBP12.33□□□□□ -0.44
KDM3B-203ENST00000505756 ROR1Q01973 937 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 STK4Q13043 487 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 SURF1Q15526 300 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 CAMK4Q16566 473 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 UVSSAQ2YD98 709 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 CTXN3Q4LDR2 81 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 PPM1LQ5SGD2 360 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 CCDC149Q6ZUS6 474 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 USP37Q86T82 979 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 RNF135Q8IUD6 432 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 CBWD2Q8IUF1 395 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 C12orf56Q8IXR9 622 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 KIAA0895Q8NCT3 520 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 FEZF2Q8TBJ5 459 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 SMG7Q92540 1137 aaKnown RBP12.33□□□□□ -0.44
KDM3B-203ENST00000505756 ZNF707Q96C28 371 aaPredicted RBP12.33□□□□□ -0.44
KDM3B-203ENST00000505756 GSDMAQ96QA5 445 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 C1QTNF1Q9BXJ1 281 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 PIDD1Q9HB75 910 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 PDE11AQ9HCR9 933 aa12.33□□□□□ -0.44
KDM3B-203ENST00000505756 RTN4Q9NQC3 1192 aaKnown RBP12.33□□□□□ -0.44
KDM3B-203ENST00000505756 WDR27A2RRH5 827 aa12.32□□□□□ -0.44
KDM3B-203ENST00000505756 TULP1O00294 542 aaPredicted RBP12.32□□□□□ -0.44
KDM3B-203ENST00000505756 SPTLC1O15269 473 aa12.32□□□□□ -0.44
KDM3B-203ENST00000505756 ABLIM3O94929 683 aa12.32□□□□□ -0.44
KDM3B-203ENST00000505756 RHOBTB3O94955 611 aa12.32□□□□□ -0.44
KDM3B-203ENST00000505756 KIF20AO95235 890 aa12.32□□□□□ -0.44
KDM3B-203ENST00000505756 POU2F2P09086 479 aa12.32□□□□□ -0.44
KDM3B-203ENST00000505756 CCDC192P0DO97 292 aa12.32□□□□□ -0.44
KDM3B-203ENST00000505756 ATF2P15336 505 aa12.32□□□□□ -0.44
KDM3B-203ENST00000505756 SP100P23497 879 aaPredicted RBP12.32□□□□□ -0.44
KDM3B-203ENST00000505756 PNPLA4P41247 253 aa12.32□□□□□ -0.44
KDM3B-203ENST00000505756 PNOCQ13519 176 aa12.32□□□□□ -0.44
KDM3B-203ENST00000505756 KCNB1Q14721 858 aa12.32□□□□□ -0.44
KDM3B-203ENST00000505756 SNRNP35Q16560 246 aaKnown RBP12.32□□□□□ -0.44
KDM3B-203ENST00000505756 SV2CQ496J9 727 aa12.32□□□□□ -0.44
KDM3B-203ENST00000505756 TPGS2Q68CL5 300 aa12.32□□□□□ -0.44
KDM3B-203ENST00000505756 PLCD3Q8N3E9 789 aa12.32□□□□□ -0.44
KDM3B-203ENST00000505756 TDRD5Q8NAT2 981 aaKnown RBP12.32□□□□□ -0.44
KDM3B-203ENST00000505756 XXYLT1Q8NBI6 393 aa12.32□□□□□ -0.44
KDM3B-203ENST00000505756 SLC7A14Q8TBB6 771 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms