RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 AXIN1O15169 862 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 EIF5BO60841 1220 aaKnown RBP10.82□□□□□ -0.68
NEDD9-210ENST00000505589 RPP40O75818 363 aaKnown RBP10.82□□□□□ -0.68
NEDD9-210ENST00000505589 OAZ2O95190 189 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 SEC24AO95486 1093 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 PROS1P07225 676 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 CCDC192P0DO97 292 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 TUFMP49411 452 aaKnown RBP10.82□□□□□ -0.68
NEDD9-210ENST00000505589 SMTNP53814 917 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 GRSF1Q12849 480 aaKnown RBP eCLIP10.82□□□□□ -0.68
NEDD9-210ENST00000505589 NR5A1Q13285 461 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 GPR17Q13304 367 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 TEAD2Q15562 447 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 ZNF568Q3ZCX4 644 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 N4BP2L1Q5TBK1 243 aaPredicted RBP10.82□□□□□ -0.68
NEDD9-210ENST00000505589 NT5DC1Q5TFE4 455 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 STPG1Q5TH74 334 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 HEATR6Q6AI08 1181 aaKnown RBP10.82□□□□□ -0.68
NEDD9-210ENST00000505589 CD300LGQ6UXG3 332 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 C11orf74Q86VG3 221 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 ARID3BQ8IVW6 561 aaPredicted RBP10.82□□□□□ -0.68
NEDD9-210ENST00000505589 ZC3H10Q96K80 434 aaKnown RBP10.82□□□□□ -0.68
NEDD9-210ENST00000505589 ZSWIM3Q96MP5 696 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 TIPINQ9BVW5 301 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 LSM14BQ9BX40 385 aaKnown RBP10.82□□□□□ -0.68
NEDD9-210ENST00000505589 ATXN3LQ9H3M9 355 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 PLEKHA5Q9HAU0 1116 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 SH2B1Q9NRF2 756 aaPredicted RBP10.82□□□□□ -0.68
NEDD9-210ENST00000505589 VPS45Q9NRW7 570 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 FOXD4L1Q9NU39 408 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 CEP72Q9P209 647 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 CNTN3Q9P232 1028 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 PCDHB8Q9UN66 801 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 F5P12259 2224 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 RALGAPA1Q6GYQ0 2036 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 NOTCH4Q99466 2003 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 TMEM8BA6NDV4 472 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 TTLL13PA6NNM8 815 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 I3L4J1 428 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 ARNTLO00327 626 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 TM4SF5O14894 197 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 GDF9O60383 454 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 EPN2O95208 641 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 KCNK5O95279 499 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 CYP3A5P20815 502 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 CTHP32929 405 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 CCR2P41597 374 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 RAP1GAPP47736 663 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 SMARCB1Q12824 385 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 STRN3Q13033 797 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 MYBPC2Q14324 1141 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 PDIA5Q14554 519 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 KARSQ15046 597 aaKnown RBP10.81□□□□□ -0.68
NEDD9-210ENST00000505589 ELF2Q15723 593 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 TAF12Q16514 161 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 FBXO43Q4G163 708 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 EARS2Q5JPH6 523 aaKnown RBP10.81□□□□□ -0.68
NEDD9-210ENST00000505589 EEF1DP3Q658K8 133 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 DIS3L2Q8IYB7 885 aaKnown RBP10.81□□□□□ -0.68
NEDD9-210ENST00000505589 HS6ST3Q8IZP7 471 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 KCTD17Q8N5Z5 321 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 C3orf58Q8NDZ4 430 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 BEST2Q8NFU1 509 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 BPIFB1Q8TDL5 484 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 DRC1Q96MC2 740 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 TBC1D32Q96NH3 1257 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 GCNAQ96QF7 691 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 TMEM209Q96SK2 561 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 GOLGA2P5Q9HBQ8 144 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 DNM3Q9UQ16 869 aa10.81□□□□□ -0.68
NEDD9-210ENST00000505589 A0A087WWV3 80 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 A0A1W2PRU2 124 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 BTBD18B2RXH4 712 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 H0YCG3 227 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 M0QZQ0 153 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 MOSPD3O75425 235 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 MED24O75448 989 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 DRD1P21728 446 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 SCP2P22307 547 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 CDC25CP30307 473 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 MCM7P33993 719 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 RDXP35241 583 aaKnown RBP10.8□□□□□ -0.68
NEDD9-210ENST00000505589 OSTNP61366 133 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 CCINQ13939 588 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 GAS6Q14393 721 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 VEPH1Q14D04 833 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 ITPRIPL2Q3MIP1 535 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 RNF43Q68DV7 783 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 MPZL3Q6UWV2 235 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 DSTYKQ6XUX3 929 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 RNF19BQ6ZMZ0 732 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 TNFRSF25Q93038 417 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 PSMG2Q969U7 264 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 LARP6Q9BRS8 491 aaKnown RBP10.8□□□□□ -0.68
NEDD9-210ENST00000505589 NTPCRQ9BSD7 190 aaKnown RBP10.8□□□□□ -0.68
NEDD9-210ENST00000505589 BHMT2Q9H2M3 363 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 PTPRHQ9HD43 1115 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 KMT5AQ9NQR1 393 aa10.8□□□□□ -0.68
NEDD9-210ENST00000505589 KMT2BQ9UMN6 2715 aaPredicted RBP10.8□□□□□ -0.68
NEDD9-210ENST00000505589 ARID2Q68CP9 1835 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms