RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 ACLYP53396 1101 aa14.21□□□□□ -0.13
LMNA-220ENST00000504687 CKAP4Q07065 602 aaKnown RBP14.21□□□□□ -0.13
LMNA-220ENST00000504687 LHX8Q68G74 356 aa14.21□□□□□ -0.13
LMNA-220ENST00000504687 C11orf63Q6NUN7 778 aa14.21□□□□□ -0.13
LMNA-220ENST00000504687 PHF13Q86YI8 300 aaPredicted RBP14.21□□□□□ -0.13
LMNA-220ENST00000504687 EIF2AQ9BY44 585 aaKnown RBP14.21□□□□□ -0.13
LMNA-220ENST00000504687 HMX1Q9NP08 348 aaPredicted RBP14.21□□□□□ -0.13
LMNA-220ENST00000504687 DPP3Q9NY33 737 aa14.21□□□□□ -0.13
LMNA-220ENST00000504687 UBQLN1Q9UMX0 589 aaKnown RBP14.21□□□□□ -0.13
LMNA-220ENST00000504687 PIN4Q9Y237 131 aaKnown RBP14.21□□□□□ -0.13
LMNA-220ENST00000504687 STXBP5LQ9Y2K9 1186 aa14.21□□□□□ -0.13
LMNA-220ENST00000504687 GPR182O15218 404 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 BUB1O43683 1085 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 CD4P01730 458 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 CHRNA1P02708 482 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 INHAP05111 366 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 FAM163BP0C2L3 166 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 HSPA8P11142 646 aaKnown RBP14.2□□□□□ -0.14
LMNA-220ENST00000504687 GNA15P30679 374 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 CHMP4BP1P59074 171 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 INCA1Q0VD86 236 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 TRIM71Q2Q1W2 868 aaKnown RBP14.2□□□□□ -0.14
LMNA-220ENST00000504687 TMEM270Q6UE05 265 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 BEST2Q8NFU1 509 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 SLC35G2Q8TBE7 412 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 ZNF296Q8WUU4 475 aaPredicted RBP14.2□□□□□ -0.14
LMNA-220ENST00000504687 ANKRD7Q92527 254 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 OSBPL9Q96SU4 736 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 TRIM6Q9C030 488 aaPredicted RBP14.2□□□□□ -0.14
LMNA-220ENST00000504687 THAP2Q9H0W7 228 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 SNTG2Q9NY99 539 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 TAS2R14Q9NYV8 317 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 KIAA1257Q9ULG3 409 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 GINS2Q9Y248 185 aa14.2□□□□□ -0.14
LMNA-220ENST00000504687 NOC2LQ9Y3T9 749 aaKnown RBP14.2□□□□□ -0.14
LMNA-220ENST00000504687 ENC1O14682 589 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 ZNF623O75123 536 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 RPS6KA5O75582 802 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 RECQL4O94761 1208 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 GRK4P32298 578 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 NAP1L1P55209 391 aaKnown RBP14.19□□□□□ -0.14
LMNA-220ENST00000504687 NOMO3P69849 1222 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 C1QBPQ07021 282 aaKnown RBP14.19□□□□□ -0.14
LMNA-220ENST00000504687 MYO1EQ12965 1108 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 ITGA7Q13683 1181 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 PTGISQ16647 500 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 MRPL10Q7Z7H8 261 aaKnown RBP14.19□□□□□ -0.14
LMNA-220ENST00000504687 HACE1Q8IYU2 909 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 ARRDC4Q8NCT1 418 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 SMG8Q8ND04 991 aaKnown RBP14.19□□□□□ -0.14
LMNA-220ENST00000504687 ZNF606Q8WXB4 792 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 RABGGTAQ92696 567 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 KIF12Q96FN5 646 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 HPDLQ96IR7 371 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 GLT1D1Q96MS3 346 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 RPS6KC1Q96S38 1066 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 LHX5Q9H2C1 402 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 ERVK-5Q9HDB9 667 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.19□□□□□ -0.142e-7■■■■■ 84.2
LMNA-220ENST00000504687 SEPT11Q9NVA2 429 aaKnown RBP14.19□□□□□ -0.14
LMNA-220ENST00000504687 LCMT1Q9UIC8 334 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 PHF24Q9UPV7 400 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 IPPQ9Y573 584 aa14.19□□□□□ -0.14
LMNA-220ENST00000504687 CTAGE15A4D2H0 777 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 PIRO00625 290 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 CILPO75339 1184 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 TUBBP07437 444 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 CTAGE8P0CG41 777 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 POLR2BP30876 1174 aaKnown RBP14.18□□□□□ -0.14
LMNA-220ENST00000504687 PNPLA4P41247 253 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 NOP2P46087 812 aaKnown RBP14.18□□□□□ -0.14
LMNA-220ENST00000504687 RAB27AP51159 221 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 LBX1P52954 281 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 WDR72Q3MJ13 1102 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 TAF3Q5VWG9 929 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 SCARA3Q6AZY7 606 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 MON1BQ7L1V2 547 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 LIMS2Q7Z4I7 341 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 CTAGE6Q86UF2 777 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 NT5DC3Q86UY8 548 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 CREG2Q8IUH2 290 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 CTAGE4Q8IX94 777 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 MCOLN2Q8IZK6 566 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 GPR161Q8N6U8 529 aaKnown RBP14.18□□□□□ -0.14
LMNA-220ENST00000504687 UBXN4Q92575 508 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 GOLGA1Q92805 767 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 WNT8BQ93098 351 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 ARHGEF26Q96DR7 871 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 HES6Q96HZ4 224 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 PBKQ96KB5 322 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 ZMAT2Q96NC0 199 aaKnown RBP14.18□□□□□ -0.14
LMNA-220ENST00000504687 NXF3Q9H4D5 531 aaKnown RBP14.18□□□□□ -0.14
LMNA-220ENST00000504687 ACP6Q9NPH0 428 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 ST3GAL5Q9UNP4 418 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 AGAP1Q9UPQ3 857 aa14.18□□□□□ -0.14
LMNA-220ENST00000504687 SMIM28A0A1B0GU29 152 aa14.17□□□□□ -0.14
LMNA-220ENST00000504687 MIF4GDA9UHW6 222 aaKnown RBP14.17□□□□□ -0.14
LMNA-220ENST00000504687 MED7O43513 233 aa14.17□□□□□ -0.14
LMNA-220ENST00000504687 KIF4AO95239 1232 aa14.17□□□□□ -0.14
LMNA-220ENST00000504687 KRT19P08727 400 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms