RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 SESN3P58005 492 aa2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 PDCD1Q15116 288 aa2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 TRIP6Q15654 476 aaKnown RBP2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 TMEM119Q4V9L6 283 aa2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 DGKKQ5KSL6 1271 aa2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 OTUD7BQ6GQQ9 843 aa2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 GSG1LQ6UXU4 331 aa2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 RASAL3Q86YV0 1011 aa2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 GPR156Q8NFN8 814 aa2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 DPP7Q9UHL4 492 aa2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 ATRNL1Q5VV63 1379 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 A0A1W2PS29 197 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 EME2A4GXA9 379 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 LINC00473A8K010 186 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 TEX33O43247 280 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 ULK1O75385 1050 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 ELFN1P0C7U0 828 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 MTHFD2P13995 350 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 NXPH1P58417 271 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 MRPS9P82933 396 aaKnown RBP2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 CDK17Q00537 523 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 DHCR24Q15392 516 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 AFMIDQ63HM1 303 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 MRPL10Q7Z7H8 261 aaKnown RBP2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 PQLC1Q8N2U9 271 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 FITM2Q8N6M3 262 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 CASKIN2Q8WXE0 1202 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 AUTS2Q8WXX7 1259 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 UBXN4Q92575 508 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 FATE1Q969F0 183 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 DRC1Q96MC2 740 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 SENP6Q9GZR1 1112 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 PIF1Q9H611 641 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 TOPORSQ9NS56 1045 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 LANCL2Q9NS86 450 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 ZBTB21Q9ULJ3 1066 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 EDARQ9UNE0 448 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 ICKQ9UPZ9 632 aa2.87□□□□□ -1.95
HMGB3P17-201ENST00000504195 CCDC78A2IDD5 438 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 FAM90A10PA6NDY2 464 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 GSG1L2A8MUP6 293 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 ADM5C9JUS6 153 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 SOCS2O14508 198 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 ZEB2O60315 1214 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 JTBO76095 146 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 OAZ2O95190 189 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 BPIP17213 487 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 MPGP29372 298 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 HILS1P60008 231 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 RPS7P62081 194 aaKnown RBP2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 ADRM1Q16186 407 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 TXNRD1Q16881 649 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 DALRD3Q5D0E6 543 aaKnown RBP2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 TAF7LQ5H9L4 462 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 MUM1L1Q5H9M0 696 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 ZNF529Q6P280 563 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 CEP85Q6P2H3 762 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 Q6ZVL8 140 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 CLNKQ7Z7G1 428 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 NPM2Q86SE8 214 aaKnown RBP2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 RBMXL3Q8N7X1 1067 aaKnown RBP2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 TOR1AIP2Q8NFQ8 470 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 PIGOQ8TEQ8 1089 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 STON2Q8WXE9 905 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 MARS2Q96GW9 593 aaKnown RBP2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 LYZL4Q96KX0 146 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 TTC1Q99614 292 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 SH2D3AQ9BRG2 576 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 PRSS22Q9GZN4 317 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 SPRTNQ9H040 489 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 GREM2Q9H772 168 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 IFT22Q9H7X7 185 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 RBM12Q9NTZ6 932 aaKnown RBP2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 TMEM140Q9NV12 185 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 MAPRE3Q9UPY8 281 aa2.86□□□□□ -1.95
HMGB3P17-201ENST00000504195 CYP2D7A0A087X1C5 515 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 PRAMEF33A0A0G2JMD5 474 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 PDE8AO60658 829 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 PRAMEF10O60809 474 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 URI1O94763 535 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 ENDOD1O94919 500 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 CYP2D6P10635 497 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 MYCLP1P12525 358 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 TNFRSF1BP20333 461 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 GUCY1A2P33402 732 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 ALDH1A3P47895 512 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 CCT2P78371 535 aaKnown RBP2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 FPGSQ05932 587 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 ITIH3Q06033 890 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 PROSER3Q2NL68 480 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 PLAC9Q5JTB6 97 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 ZNF66Q6ZN08 573 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 SEM1Q6ZVN7 128 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 Q8NA96 180 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 CLRN3Q8NCR9 226 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 ADI1Q9BV57 179 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 QTRT1Q9BXR0 403 aaKnown RBP2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 ACE2Q9BYF1 805 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 IFT122Q9HBG6 1241 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 KLC4Q9NSK0 619 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms