RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 SRPK1Q96SB4 655 aaKnown RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 PI4K2AQ9BTU6 479 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 DEFB129Q9H1M3 183 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 RPAP3Q9H6T3 665 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 TMCO1Q9UM00 188 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 STK38LQ9Y2H1 464 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 KIF13BQ9NQT8 1826 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 NCANO14594 1321 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 PFASO15067 1338 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 ADGRA3Q8IWK6 1321 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 TCRBV7S2A1N4TA0A589 114 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 H0YGN5 161 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 ZNF862O60290 1169 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 SPATA31D3P0C874 917 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 HARSP12081 509 aaKnown RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 HOXD12P35452 270 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 MAP3K10Q02779 954 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 DHX9Q08211 1270 aaKnown RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 ZNF844Q08AG5 666 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 CUL1Q13616 776 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 LBRQ14739 615 aaKnown RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 TAF11Q15544 211 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 CLPPQ16740 277 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 TMEM259Q4ZIN3 620 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 ZNF362Q5T0B9 420 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 ZFYVE27Q5T4F4 411 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 NBPF12Q5TAG4 269 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 SPATA31D4Q6ZUB0 917 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 ILDR2Q71H61 639 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 PHLDB2Q86SQ0 1253 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 CACNA2D3Q8IZS8 1091 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 TEX9Q8N6V9 391 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 TMEM161BQ8NDZ6 487 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 LPAR1Q92633 364 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 ZBED3Q96IU2 234 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 ATP6V1G3Q96LB4 118 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 IWS1Q96ST2 819 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 KIAA1683Q9H0B3 1180 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 CARD9Q9H257 536 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 PCDH18Q9HCL0 1135 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 PXMP2Q9NR77 195 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 TBC1D22BQ9NU19 505 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 RABL2AQ9UBK7 228 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 DBR1Q9UK59 544 aaKnown RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 TBX20Q9UMR3 447 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 UTP11Q9Y3A2 253 aaKnown RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 CTDP1Q9Y5B0 961 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-208ENST00000503004 NFS1Q9Y697 457 aa5.48□□□□□ -1.53
CLDND1-208ENST00000503004 GMNCA6NCL1 334 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 WDR64B1ANS9 1081 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 VWA5AO00534 786 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 HNRNPDLO14979 420 aaKnown RBP5.47□□□□□ -1.53
CLDND1-208ENST00000503004 TIMM44O43615 452 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 PEX10O60683 326 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 RGS20O76081 388 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 CHRNB2P17787 502 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 COMTP21964 271 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 VARSP26640 1264 aaKnown RBP5.47□□□□□ -1.53
CLDND1-208ENST00000503004 PLTPP55058 493 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 PSMC5P62195 406 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 DR1Q01658 176 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 NSUN2Q08J23 767 aaKnown RBP eCLIP5.47□□□□□ -1.53
CLDND1-208ENST00000503004 HIC1Q14526 733 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 SGSM1Q2NKQ1 1148 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 P3H1Q32P28 736 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 UBAP2Q5T6F2 1119 aaKnown RBP5.47□□□□□ -1.53
CLDND1-208ENST00000503004 CIAPIN1Q6FI81 312 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 OR52E8Q6IFG1 317 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 SLC39A4Q6P5W5 647 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 PACS1Q6VY07 963 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 TMC3Q7Z5M5 1100 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 C4orf19Q8IY42 314 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 KIF2BQ8N4N8 673 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 CCDC63Q8NA47 563 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 CXorf38Q8TB03 319 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 FBXO25Q8TCJ0 367 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 ATP8B4Q8TF62 1192 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 CEP170P1Q96L14 293 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 RPS6KC1Q96S38 1066 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 SLITRK6Q9H5Y7 841 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 RNF146Q9NTX7 359 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 GABBR1Q9UBS5 961 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 EFR3BQ9Y2G0 817 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 SNX24Q9Y343 169 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 TIMM22Q9Y584 194 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.47□□□□□ -1.53
CLDND1-208ENST00000503004 ATP9BO43861 1147 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 NR3C2P08235 984 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 MYZAPP0CAP1 466 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 GHRP10912 638 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 PYGMP11217 842 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 CYP11B1P15538 503 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 KCNJ1P48048 391 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 HMGCS2P54868 508 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 NCKAP1LP55160 1127 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 PTENP60484 403 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 KCNJ2P63252 427 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 GPC5P78333 572 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 FMO1Q01740 532 aa5.47□□□□□ -1.53
CLDND1-208ENST00000503004 TAGLNQ01995 201 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms