RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 PGM3O95394 542 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 FGFR1OPO95684 399 aaKnown RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 GGPS1O95749 300 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 IFNB1P01574 187 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 TUBB4AP04350 444 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 CD9P21926 228 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 MTHFRP42898 656 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 SLC5A3P53794 718 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 YWHAHQ04917 246 aaPredicted RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 ADCY2Q08462 1091 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 BFSP1Q12934 665 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 SEC23AQ15436 765 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 NBPF12Q5TAG4 269 aaPredicted RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 MBNL2Q5VZF2 373 aaKnown RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 CNKSR3Q6P9H4 555 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 CRELD2Q6UXH1 353 aaPredicted RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 WDR63Q8IWG1 891 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 RPAP2Q8IXW5 612 aaPredicted RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 CHST13Q8NET6 341 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 FAM71BQ8TC56 605 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 PIGOQ8TEQ8 1089 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 HDAC7Q8WUI4 952 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 FAM120BQ96EK7 910 aaKnown RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 FEM1CQ96JP0 617 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 THUMPD3Q9BV44 507 aaKnown RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 ANKRD2Q9GZV1 360 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.05□□□□□ -1.76
SUB1-202ENST00000502453 TSPYL1Q9H0U9 437 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 OPA3Q9H6K4 179 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 COPS7BQ9H9Q2 264 aaPredicted RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 CPSF2Q9P2I0 782 aaKnown RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 ZC3H7BQ9UGR2 993 aaKnown RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 MINPP1Q9UNW1 487 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 CLCA2Q9UQC9 943 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 V9GYY5 206 aaPredicted RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 TBKBP1A7MCY6 615 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 SCDO00767 359 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 MEFVO15553 781 aaPredicted RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 SMPD2O60906 423 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 ITGA2BP08514 1039 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 HSPA1AP0DMV8 641 aaKnown RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 HSPA1BP0DMV9 641 aaKnown RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 CPA1P15085 419 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 TMEM11P17152 192 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 RPIAP49247 311 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 CYP4F3Q08477 520 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 CBX3Q13185 183 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 ACVR2BQ13705 512 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 RAB30Q15771 203 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 NKG7Q16617 165 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 ATPAF1Q5TC12 328 aaPredicted RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 SFMBT2Q5VUG0 894 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 ATG16L1Q676U5 607 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 MTERF4Q7Z6M4 381 aaKnown RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 ARMC8Q8IUR7 673 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 ZMAT4Q9H898 229 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 DNAJB9Q9UBS3 223 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 CORO1CQ9ULV4 474 aaPredicted RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 SUFUQ9UMX1 484 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 PCDHA3Q9Y5H8 950 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 PSAT1Q9Y617 370 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 LACTBL1A8MY62 500 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 UBXN8O00124 270 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 CASQ2O14958 399 aaPredicted RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 ZIC2O95409 532 aaPredicted RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 PDHBP11177 359 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 TFEBP19484 476 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 ALDH3A2P51648 485 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 JAM2P57087 298 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 FOXO4P98177 505 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 DEUP1Q05D60 604 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 TFCP2Q12800 502 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 SNW1Q13573 536 aaKnown RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 FGL2Q14314 439 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 SSPNQ14714 243 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 ARHGEF6Q15052 776 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 TBC1D25Q3MII6 688 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 BORAQ6PGQ7 559 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 PXKQ7Z7A4 578 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 LRRC49Q8IUZ0 686 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 SLC7A5P1Q8MH63 180 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 KREMEN2Q8NCW0 462 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 OR10H5Q8NGA6 315 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 OR1N1Q8NGS0 311 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 FBXO30Q8TB52 745 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 DENND1AQ8TEH3 1009 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 RMDN2Q96LZ7 410 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 TCEANC2Q96MN5 208 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 DACH2Q96NX9 599 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 RBM14Q96PK6 669 aaKnown RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 CITED2Q99967 270 aaPredicted RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 TTPALQ9BTX7 342 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 MAK16Q9BXY0 300 aaKnown RBP4.05□□□□□ -1.76
SUB1-202ENST00000502453 CAPS2Q9BXY5 557 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 USP44Q9H0E7 712 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 PDE7BQ9NP56 450 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 TIMMDC1Q9NPL8 285 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 PRDM6Q9NQX0 595 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 SNTG1Q9NSN8 517 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 CHMP5Q9NZZ3 219 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms