RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 TRIM44Q96DX7 344 aaPredicted RBP5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 PPP1R9BQ96SB3 815 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 GPR20Q99678 358 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 G6PC3Q9BUM1 346 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 NT5C3AQ9H0P0 336 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 RAVER2Q9HCJ3 691 aaKnown RBP5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 KCNMB3Q9NPA1 279 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 CRTAC1Q9NQ79 661 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 FAM8A1Q9UBU6 413 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 ADAM30Q9UKF2 790 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 ADAMTS5Q9UNA0 930 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 MYRFQ9Y2G1 1151 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 PCDHB5Q9Y5E4 795 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 PCDHA5Q9Y5H7 936 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 ZNF536O15090 1300 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 KDM3AQ9Y4C1 1321 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 NCOR1O75376 2440 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 CFAP54Q96N23 3096 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 PHIPQ8WWQ0 1821 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 A0A087X0B3 334 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 IKBKBO14920 756 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 SLC37A4O43826 429 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 EDIL3O43854 480 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 STAT3P40763 770 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 SARSP49591 514 aaKnown RBP5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 CDR1P51861 262 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 RPS26P62854 115 aaKnown RBP5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 IRX3P78415 501 aaPredicted RBP5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 SETQ01105 290 aaPredicted RBP5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 MORC3Q14149 939 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 KARSQ15046 597 aaKnown RBP5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 IQCB1Q15051 598 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 SLC14A2Q15849 920 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 CLEC16AQ2KHT3 1053 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 PRR16Q569H4 304 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 HAUS3Q68CZ6 603 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 SNRNP48Q6IEG0 339 aaKnown RBP5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 XRRA1Q6P2D8 792 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 GADL1Q6ZQY3 521 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 RNF207Q6ZRF8 634 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 NIPA1Q7RTP0 329 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 PLA2G4DQ86XP0 818 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 TMEFF1Q8IYR6 380 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 LINC01356Q8N9X3 169 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 CHST13Q8NET6 341 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 SPATA20Q8TB22 786 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 RNF141Q8WVD5 230 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 CLEC4DQ8WXI8 215 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 TBC1D5Q92609 795 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 HAS1Q92839 578 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 ERCC4Q92889 916 aaPredicted RBP5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 TEX13BQ9BXU2 312 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 RNF146Q9NTX7 359 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 FBXO40Q9UH90 709 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 MAN1B1Q9UKM7 699 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 ATP11BQ9Y2G3 1177 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 ZNF281Q9Y2X9 895 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 MGAMO43451 1857 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 REV3LO60673 3130 aa5.88□□□□□ -1.47
HMGXB4-208ENST00000498325 MYH7BA7E2Y1 1941 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 RBM47A0AV96 593 aaKnown RBP5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 PP2D1A8MPX8 630 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 GOLGA6L6A8MZA4 724 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 B4DLN1 442 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 FAM86B1E9PN63 330 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 MEIS1O00470 390 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 NRDCO43847 1150 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 SLC25A27O95847 323 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 RPN1P04843 607 aaKnown RBP5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 TPM2P07951 284 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 FAM86B2P0C5J1 330 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 PLCG1P19174 1290 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 MUTP22033 750 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 ERCC5P28715 1186 aaPredicted RBP5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 CDC25AP30304 524 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 COPB2P35606 906 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 CCT6AP40227 531 aaKnown RBP5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 PPP1R2P41236 205 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 MAPK8P45983 427 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 RPS6P62753 249 aaKnown RBP5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 YBX1P67809 324 aaKnown RBP5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 CACNB2Q08289 660 aaPredicted RBP5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 STIM1Q13586 685 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 PLS1Q14651 629 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 KCNB1Q14721 858 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 RTP5Q14D33 572 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 TMEM132BQ14DG7 1078 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 AAK1Q2M2I8 961 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 CEP55Q53EZ4 464 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 ARHGEF16Q5VV41 709 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 ALG1LQ6GMV1 187 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 ISM2Q6H9L7 571 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 NSMFQ6X4W1 530 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 C11orf57Q6ZUT1 292 aaPredicted RBP5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 LUZP1Q86V48 1076 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 GRAMD1CQ8IYS0 662 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 AOPEPQ8N6M6 819 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 ANKRD13CQ8N6S4 541 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 PRSS33Q8NF86 280 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 REPS2Q8NFH8 660 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms