RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 FGF18O76093 207 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 ARHGEF15O94989 841 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 CSPG5O95196 566 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 CST3P01034 146 aaPredicted RBP12.31□□□□□ -0.44
CTTN-208ENST00000498223 ZNF18P17022 549 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 BRCC3P46736 316 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 ERVK-21P61565 698 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 TNNC1P63316 161 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 SGSM1Q2NKQ1 1148 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 CBWD6Q4V339 395 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 EPC2Q52LR7 807 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 ZNF667Q5HYK9 610 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 CBWD3Q5JTY5 395 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 CBWD5Q5RIA9 395 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 KIAA1841Q6NSI8 718 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 GBP6Q6ZN66 633 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 GAS2L3Q86XJ1 694 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 CEP57Q86XR8 500 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 SLC39A11Q8N1S5 342 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 TAS1R2Q8TE23 839 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 PI4K2AQ9BTU6 479 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 C11orf84Q9BUA3 381 aaPredicted RBP12.31□□□□□ -0.44
CTTN-208ENST00000498223 PLVAPQ9BX97 442 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 NXF1Q9UBU9 619 aaKnown RBP12.31□□□□□ -0.44
CTTN-208ENST00000498223 COL4A4P53420 1690 aaPredicted RBP12.31□□□□□ -0.44
CTTN-208ENST00000498223 SF3B1O75533 1304 aaKnown RBP eCLIP12.31□□□□□ -0.442e-6■■■■■ 146.9
CTTN-208ENST00000498223 CHD9Q3L8U1 2897 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 ATG2AQ2TAZ0 1938 aa12.31□□□□□ -0.44
CTTN-208ENST00000498223 TSC2P49815 1807 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 ARHGEF37A1IGU5 675 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 KPNA7A9QM74 516 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 TMEM189-UBE2V1I3L0A0 370 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 CYB561D2O14569 222 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 P4HA2O15460 535 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 VNN1O95497 513 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 ITGB1P05556 798 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 RB1P06400 928 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 P4HA1P13674 534 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 ATICP31939 592 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 FANCCQ00597 558 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 UBXN1Q04323 297 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 LRMPQ12912 555 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 ELAVL2Q12926 359 aaKnown RBP12.3□□□□□ -0.44
CTTN-208ENST00000498223 GPM6BQ13491 265 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 ADGRE1Q14246 886 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 BMS1Q14692 1282 aaKnown RBP12.3□□□□□ -0.44
CTTN-208ENST00000498223 WDR72Q3MJ13 1102 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 MIIPQ5JXC2 388 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 FAM171A1Q5VUB5 890 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 SCARA3Q6AZY7 606 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 FUT10Q6P4F1 479 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 C15orf39Q6ZRI6 1047 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 SPRED2Q7Z698 418 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 LRRC52Q8N7C0 313 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 C3orf58Q8NDZ4 430 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 ELMO3Q96BJ8 720 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 SENP8Q96LD8 212 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 MMS19Q96T76 1030 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 CRACR2AQ9BSW2 395 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 HSD3B7Q9H2F3 369 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 ALG13Q9NP73 1137 aaKnown RBP12.3□□□□□ -0.44
CTTN-208ENST00000498223 MARCH5Q9NX47 278 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 RAB20Q9NX57 234 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 GCNT4Q9P109 453 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 SNX9Q9Y5X1 595 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 TTC28Q96AY4 2481 aa12.3□□□□□ -0.44
CTTN-208ENST00000498223 SPTBN5Q9NRC6 3674 aaKnown RBP12.3□□□□□ -0.44
CTTN-208ENST00000498223 LPXNO60711 386 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 HUS1O60921 280 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 ODC1P11926 461 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 PAX3P23760 479 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 UBASH3AP57075 661 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 LILRA4P59901 499 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 NOP14P78316 857 aaKnown RBP12.29□□□□□ -0.44
CTTN-208ENST00000498223 EXOC3L4Q17RC7 722 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 TIGD5Q53EQ6 642 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 SPOPLQ6IQ16 392 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 SCARA5Q6ZMJ2 495 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 DDX53Q86TM3 631 aaKnown RBP12.29□□□□□ -0.44
CTTN-208ENST00000498223 TMEM173Q86WV6 379 aaPredicted RBP12.29□□□□□ -0.44
CTTN-208ENST00000498223 METTL23Q86XA0 190 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 VPS52Q8N1B4 723 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 EHBP1Q8NDI1 1231 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 APPL2Q8NEU8 664 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 MICAL1Q8TDZ2 1067 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 BCL7CQ8WUZ0 217 aaPredicted RBP12.29□□□□□ -0.44
CTTN-208ENST00000498223 TAF4BQ92750 862 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 SEMA4DQ92854 862 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 NT5C1BQ96P26 610 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 GPR62Q9BZJ7 368 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 INTS2Q9H0H0 1204 aaKnown RBP12.29□□□□□ -0.44
CTTN-208ENST00000498223 MTCL1Q9Y4B5 1905 aaKnown RBP12.29□□□□□ -0.44
CTTN-208ENST00000498223 PRUNE2Q8WUY3 3088 aa12.29□□□□□ -0.44
CTTN-208ENST00000498223 LGALS16A8MUM7 142 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 C2CD2LO14523 706 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 SPTLC1O15269 473 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 PMM2O15305 246 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 CBFA2T2O43439 604 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 TPM3P06753 285 aa12.28□□□□□ -0.44
CTTN-208ENST00000498223 IGFBP4P22692 258 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms