RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 SF3B1O75533 1304 aaKnown RBP eCLIP14.59□□□□□ -0.07
CPNE1-227ENST00000498056 A0A1W2PPC1 479 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 GTPBP10A4D1E9 387 aaKnown RBP14.58□□□□□ -0.08
CPNE1-227ENST00000498056 SPTLC1O15269 473 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 TEX33O43247 280 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 TADA2AO75478 443 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 ASS1P00966 412 aaKnown RBP14.58□□□□□ -0.08
CPNE1-227ENST00000498056 CST3P01034 146 aaPredicted RBP14.58□□□□□ -0.08
CPNE1-227ENST00000498056 ALDH2P05091 517 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 IGFBP6P24592 240 aaPredicted RBP14.58□□□□□ -0.08
CPNE1-227ENST00000498056 MCCD1P59942 119 aaPredicted RBP14.58□□□□□ -0.08
CPNE1-227ENST00000498056 SYCP1Q15431 976 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 WDR44Q5JSH3 913 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 FUT10Q6P4F1 479 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 TRIM65Q6PJ69 517 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 DSTYKQ6XUX3 929 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 CLP1Q92989 425 aaKnown RBP14.58□□□□□ -0.08
CPNE1-227ENST00000498056 TIFAQ96CG3 184 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 NT5C1BQ96P26 610 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 TRIM5Q9C035 493 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 NIF3L1Q9GZT8 377 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 RTN4Q9NQC3 1192 aaKnown RBP14.58□□□□□ -0.08
CPNE1-227ENST00000498056 SPG21Q9NZD8 308 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 POLIQ9UNA4 740 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 COQ4Q9Y3A0 265 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 SNX9Q9Y5X1 595 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 LAMA3Q16787 3333 aa14.58□□□□□ -0.08
CPNE1-227ENST00000498056 CARNS1A5YM72 827 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 KPNA7A9QM74 516 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 PMM2O15305 246 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 LINC00271P0C7V0 271 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 ODC1P11926 461 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 SLC9A1P19634 815 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 ATICP31939 592 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 KLK7P49862 253 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 LILRA4P59901 499 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 SMAD3P84022 425 aaKnown RBP14.57□□□□□ -0.08
CPNE1-227ENST00000498056 TAP1Q03518 808 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 SGSM1Q2NKQ1 1148 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 UVSSAQ2YD98 709 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 DCLRE1AQ6PJP8 1040 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 SARM1Q6SZW1 724 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 IGSF21Q96ID5 467 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 NAP1L5Q96NT1 182 aaPredicted RBP14.57□□□□□ -0.08
CPNE1-227ENST00000498056 TGS1Q96RS0 853 aaKnown RBP14.57□□□□□ -0.08
CPNE1-227ENST00000498056 MMS19Q96T76 1030 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 XYLT2Q9H1B5 865 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 SMYD3Q9H7B4 428 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 CERS4Q9HA82 394 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 SLC28A3Q9HAS3 691 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 GRPEL1Q9HAV7 217 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 FAM207AQ9NSI2 230 aaPredicted RBP14.57□□□□□ -0.08
CPNE1-227ENST00000498056 MYO16Q9Y6X6 1858 aa14.57□□□□□ -0.08
CPNE1-227ENST00000498056 LRRC10BA6NIK2 292 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 FGF18O76093 207 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 STAU1O95793 577 aaKnown RBP14.56□□□□□ -0.08
CPNE1-227ENST00000498056 P4HA1P13674 534 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 PON1P27169 355 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 CA8P35219 290 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 RAP1GAPP47736 663 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 APBA1Q02410 837 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 WDR72Q3MJ13 1102 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 TIGD5Q53EQ6 642 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 ARHGEF19Q8IW93 802 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 PPM1KQ8N3J5 372 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 KLHL23Q8NBE8 558 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 FBXO22Q8NEZ5 403 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 TAF4BQ92750 862 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 SENP8Q96LD8 212 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 SAMD11Q96NU1 681 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 APOBEC3GQ9HC16 384 aaKnown RBP14.56□□□□□ -0.08
CPNE1-227ENST00000498056 PATJQ8NI35 1801 aa14.56□□□□□ -0.08
CPNE1-227ENST00000498056 CYB561D2O14569 222 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 AP5Z1O43299 807 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 TRAPPC3O43617 180 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 TKTP29401 623 aaKnown RBP14.55□□□□□ -0.08
CPNE1-227ENST00000498056 BMPR1AP36894 532 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 ASPAP45381 313 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 AARSP49588 968 aaKnown RBP eCLIP14.55□□□□□ -0.08
CPNE1-227ENST00000498056 ELAVL2Q12926 359 aaKnown RBP14.55□□□□□ -0.08
CPNE1-227ENST00000498056 GJB7Q6PEY0 223 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 CD300LGQ6UXG3 332 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 CEP57Q86XR8 500 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 ADGRF2Q8IZF7 708 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 EHBP1Q8NDI1 1231 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 NEK11Q8NG66 645 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 GDPD5Q8WTR4 605 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 ARNTL2Q8WYA1 636 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 SUSD3Q96L08 255 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 B3GALT6Q96L58 329 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 ERGIC2Q96RQ1 377 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 ARID3AQ99856 593 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 C11orf84Q9BUA3 381 aaPredicted RBP14.55□□□□□ -0.08
CPNE1-227ENST00000498056 HERC2P3Q9BVR0 1158 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 GPR62Q9BZJ7 368 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 APEX2Q9UBZ4 518 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 L1RE1Q9UN81 338 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 SIK3Q9Y2K2 1263 aa14.55□□□□□ -0.08
CPNE1-227ENST00000498056 MTCL1Q9Y4B5 1905 aaKnown RBP14.54□□□□□ -0.08
CPNE1-227ENST00000498056 ARHGEF37A1IGU5 675 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms