RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 KRT13P13646 458 aa17.48■□□□□ 0.39
FAM3A-220ENST00000497506 AP3M2P53677 418 aa17.48■□□□□ 0.39
FAM3A-220ENST00000497506 MRPL58Q14197 206 aaKnown RBP17.48■□□□□ 0.39
FAM3A-220ENST00000497506 CAVIN1Q6NZI2 390 aaKnown RBP17.48■□□□□ 0.39
FAM3A-220ENST00000497506 DSTYKQ6XUX3 929 aa17.48■□□□□ 0.39
FAM3A-220ENST00000497506 LRRC52Q8N7C0 313 aa17.48■□□□□ 0.39
FAM3A-220ENST00000497506 SENP8Q96LD8 212 aa17.48■□□□□ 0.39
FAM3A-220ENST00000497506 CDCA3Q99618 268 aaPredicted RBP17.48■□□□□ 0.39
FAM3A-220ENST00000497506 IGFLR1Q9H665 355 aa17.48■□□□□ 0.39
FAM3A-220ENST00000497506 FNIP2Q9P278 1114 aa17.48■□□□□ 0.39
FAM3A-220ENST00000497506 TSC2P49815 1807 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 KPNA7A9QM74 516 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 TEX28O15482 410 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 LINC01565O15544 149 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 TRIM49P0CI25 452 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 TRIM49CP0CI26 452 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 RPL17P18621 184 aaKnown RBP17.47■□□□□ 0.39
FAM3A-220ENST00000497506 PNPLA4P41247 253 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 ADAM15Q13444 863 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 KCNC3Q14003 757 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 PSMD5Q16401 504 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 CTC1Q2NKJ3 1217 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 SV2CQ496J9 727 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 TDRD10Q5VZ19 366 aaKnown RBP17.47■□□□□ 0.39
FAM3A-220ENST00000497506 PDXDC1Q6P996 788 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 C15orf39Q6ZRI6 1047 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 EFHBQ8N7U6 833 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 VN1R2Q8NFZ6 395 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 ZNF560Q96MR9 790 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 SRRTQ9BXP5 876 aaKnown RBP17.47■□□□□ 0.39
FAM3A-220ENST00000497506 EMILIN2Q9BXX0 1053 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.47■□□□□ 0.39
FAM3A-220ENST00000497506 PLXNA3P51805 1871 aa17.47■□□□□ 0.39
FAM3A-220ENST00000497506 NCK2O43639 380 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 TBC1D4O60343 1298 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 VNN1O95497 513 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 GLP2RO95838 553 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 ERCC5P28715 1186 aaPredicted RBP17.46■□□□□ 0.39
FAM3A-220ENST00000497506 RBM10P98175 930 aaKnown RBP17.46■□□□□ 0.39
FAM3A-220ENST00000497506 PPP3CAQ08209 521 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 ZACNQ401N2 412 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 VARS2Q5ST30 1063 aaKnown RBP17.46■□□□□ 0.39
FAM3A-220ENST00000497506 SASS6Q6UVJ0 657 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 RSPO2Q6UXX9 243 aaPredicted RBP17.46■□□□□ 0.39
FAM3A-220ENST00000497506 ANKS3Q6ZW76 656 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 SV2AQ7L0J3 742 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 FRMD5Q7Z6J6 570 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 USP37Q86T82 979 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 SLC22A17Q8WUG5 538 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 PABPC5Q96DU9 382 aaKnown RBP17.46■□□□□ 0.39
FAM3A-220ENST00000497506 HPDLQ96IR7 371 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 CLSTN3Q9BQT9 956 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 MTRRQ9UBK8 725 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 ARMCX3Q9UH62 379 aaPredicted RBP17.46■□□□□ 0.39
FAM3A-220ENST00000497506 DACH1Q9UI36 760 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 TIMM13Q9Y5L4 95 aaPredicted RBP17.46■□□□□ 0.39
FAM3A-220ENST00000497506 BACE2Q9Y5Z0 518 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 COL6A3P12111 3177 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 EYSQ5T1H1 3165 aa17.46■□□□□ 0.39
FAM3A-220ENST00000497506 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.45■□□□□ 0.38
FAM3A-220ENST00000497506 CYB561D2O14569 222 aa17.45■□□□□ 0.38
FAM3A-220ENST00000497506 ADAM12O43184 909 aa17.45■□□□□ 0.38
FAM3A-220ENST00000497506 CYP11A1P05108 521 aa17.45■□□□□ 0.38
FAM3A-220ENST00000497506 ODC1P11926 461 aa17.45■□□□□ 0.38
FAM3A-220ENST00000497506 TYMPP19971 482 aa17.45■□□□□ 0.38
FAM3A-220ENST00000497506 KLRC2P26717 231 aa17.45■□□□□ 0.38
FAM3A-220ENST00000497506 CREMQ03060 361 aa17.45■□□□□ 0.38
FAM3A-220ENST00000497506 BIRC3Q13489 604 aa17.45■□□□□ 0.38
FAM3A-220ENST00000497506 SKIV2LQ15477 1246 aaKnown RBP17.45■□□□□ 0.38
FAM3A-220ENST00000497506 CT47A1Q5JQC4 288 aaPredicted RBP17.45■□□□□ 0.38
FAM3A-220ENST00000497506 APPL2Q8NEU8 664 aa17.45■□□□□ 0.38
FAM3A-220ENST00000497506 SYAP1Q96A49 352 aaPredicted RBP17.45■□□□□ 0.38
FAM3A-220ENST00000497506 XYLT2Q9H1B5 865 aa17.45■□□□□ 0.38
FAM3A-220ENST00000497506 METTL14Q9HCE5 456 aaKnown RBP17.45■□□□□ 0.38
FAM3A-220ENST00000497506 PRDM6Q9NQX0 595 aa17.45■□□□□ 0.38
FAM3A-220ENST00000497506 GDAP2Q9NXN4 497 aa17.45■□□□□ 0.38
FAM3A-220ENST00000497506 FSD2A1L4K1 749 aa17.44■□□□□ 0.38
FAM3A-220ENST00000497506 PHACTR2O75167 634 aa17.44■□□□□ 0.38
FAM3A-220ENST00000497506 OAZ2O95190 189 aa17.44■□□□□ 0.38
FAM3A-220ENST00000497506 ADH1AP07327 375 aa17.44■□□□□ 0.38
FAM3A-220ENST00000497506 GTF2H1P32780 548 aa17.44■□□□□ 0.38
FAM3A-220ENST00000497506 LTBRP36941 435 aa17.44■□□□□ 0.38
FAM3A-220ENST00000497506 GCLMP48507 274 aa17.44■□□□□ 0.38
FAM3A-220ENST00000497506 NDUFV1P49821 464 aa17.44■□□□□ 0.38
FAM3A-220ENST00000497506 CLCN4P51793 760 aa17.44■□□□□ 0.38
FAM3A-220ENST00000497506 MYL6P60660 151 aa17.44■□□□□ 0.38
FAM3A-220ENST00000497506 MYO1EQ12965 1108 aa17.44■□□□□ 0.38
FAM3A-220ENST00000497506 TMEM184AQ6ZMB5 413 aa17.44■□□□□ 0.38
FAM3A-220ENST00000497506 GLYCTKQ8IVS8 523 aa17.44■□□□□ 0.38
FAM3A-220ENST00000497506 SLC35C1Q96A29 364 aa17.44■□□□□ 0.38
FAM3A-220ENST00000497506 CLDND1Q9NY35 253 aa17.44■□□□□ 0.38
FAM3A-220ENST00000497506 R3HCC1Q9Y3T6 440 aaKnown RBP17.44■□□□□ 0.38
FAM3A-220ENST00000497506 HCFC2Q9Y5Z7 792 aa17.44■□□□□ 0.38
FAM3A-220ENST00000497506 MTCL1Q9Y4B5 1905 aaKnown RBP17.43■□□□□ 0.38
FAM3A-220ENST00000497506 H7C4K7 107 aa17.43■□□□□ 0.38
FAM3A-220ENST00000497506 FGFR1OPO95684 399 aaKnown RBP17.43■□□□□ 0.38
FAM3A-220ENST00000497506 STAU1O95793 577 aaKnown RBP17.43■□□□□ 0.38
FAM3A-220ENST00000497506 GNA14O95837 355 aa17.43■□□□□ 0.38
FAM3A-220ENST00000497506 EPCAMP16422 314 aa17.43■□□□□ 0.38
FAM3A-220ENST00000497506 ATICP31939 592 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms