RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 FOXD4L4Q8WXT5 416 aaPredicted RBP17.04■□□□□ 0.32
HDAC4-213ENST00000496347 DHX58Q96C10 678 aa17.04■□□□□ 0.32
HDAC4-213ENST00000496347 PYM1Q9BRP8 204 aaKnown RBP17.04■□□□□ 0.32
HDAC4-213ENST00000496347 PANK2Q9BZ23 570 aa17.04■□□□□ 0.32
HDAC4-213ENST00000496347 TMEM206Q9H813 350 aa17.04■□□□□ 0.32
HDAC4-213ENST00000496347 AVENQ9NQS1 362 aaPredicted RBP17.04■□□□□ 0.32
HDAC4-213ENST00000496347 AFF4Q9UHB7 1163 aaKnown RBP17.04■□□□□ 0.32
HDAC4-213ENST00000496347 INSL5Q9Y5Q6 135 aa17.04■□□□□ 0.32
HDAC4-213ENST00000496347 UBE4BO95155 1302 aa17.03■□□□□ 0.32
HDAC4-213ENST00000496347 ANO9A1A5B4 782 aa17.03■□□□□ 0.32
HDAC4-213ENST00000496347 OR6C75A6NL08 312 aa17.03■□□□□ 0.32
HDAC4-213ENST00000496347 KIAA0391O15091 583 aaKnown RBP17.03■□□□□ 0.32
HDAC4-213ENST00000496347 CPB1P15086 417 aa17.03■□□□□ 0.32
HDAC4-213ENST00000496347 ME1P48163 572 aa17.03■□□□□ 0.32
HDAC4-213ENST00000496347 GUCY2FP51841 1108 aa17.03■□□□□ 0.32
HDAC4-213ENST00000496347 NUBP1P53384 320 aa17.03■□□□□ 0.32
HDAC4-213ENST00000496347 LILRA4P59901 499 aa17.03■□□□□ 0.32
HDAC4-213ENST00000496347 DSTYKQ6XUX3 929 aa17.03■□□□□ 0.32
HDAC4-213ENST00000496347 MTSS1LQ765P7 747 aa17.03■□□□□ 0.32
HDAC4-213ENST00000496347 BRSK2Q8IWQ3 736 aa17.03■□□□□ 0.32
HDAC4-213ENST00000496347 SYCP3Q8IZU3 236 aa17.03■□□□□ 0.32
HDAC4-213ENST00000496347 FGF13Q92913 245 aa17.03■□□□□ 0.32
HDAC4-213ENST00000496347 DSEQ9UL01 958 aa17.03■□□□□ 0.32
HDAC4-213ENST00000496347 PIRO00625 290 aa17.02■□□□□ 0.32
HDAC4-213ENST00000496347 EIF3DO15371 548 aaKnown RBP eCLIP17.02■□□□□ 0.32
HDAC4-213ENST00000496347 LDHAP00338 332 aaKnown RBP17.02■□□□□ 0.32
HDAC4-213ENST00000496347 SRFP11831 508 aa17.02■□□□□ 0.32
HDAC4-213ENST00000496347 VCPP55072 806 aaKnown RBP17.02■□□□□ 0.32
HDAC4-213ENST00000496347 ARPP19P56211 112 aa17.02■□□□□ 0.32
HDAC4-213ENST00000496347 ASIC1P78348 528 aa17.02■□□□□ 0.32
HDAC4-213ENST00000496347 NTHL1P78549 312 aa17.02■□□□□ 0.32
HDAC4-213ENST00000496347 RESP18Q5W5W9 173 aa17.02■□□□□ 0.32
HDAC4-213ENST00000496347 OVOS1Q6IE37 1185 aa17.02■□□□□ 0.32
HDAC4-213ENST00000496347 CRELD2Q6UXH1 353 aaPredicted RBP17.02■□□□□ 0.32
HDAC4-213ENST00000496347 EFCAB13Q8IY85 973 aa17.02■□□□□ 0.32
HDAC4-213ENST00000496347 ZNF560Q96MR9 790 aa17.02■□□□□ 0.32
HDAC4-213ENST00000496347 FAM213AQ9BRX8 229 aa17.02■□□□□ 0.32
HDAC4-213ENST00000496347 FGFBP2Q9BYJ0 223 aa17.02■□□□□ 0.32
HDAC4-213ENST00000496347 IKZF4Q9H2S9 585 aa17.02■□□□□ 0.32
HDAC4-213ENST00000496347 MFSD1Q9H3U5 465 aa17.02■□□□□ 0.32
HDAC4-213ENST00000496347 CYP4F11Q9HBI6 524 aa17.02■□□□□ 0.32
HDAC4-213ENST00000496347 FAM13BQ9NYF5 915 aa17.02■□□□□ 0.32
HDAC4-213ENST00000496347 VPS13AQ96RL7 3174 aa17.01■□□□□ 0.31
HDAC4-213ENST00000496347 PPEF2O14830 753 aa17.01■□□□□ 0.31
HDAC4-213ENST00000496347 PDGFBP01127 241 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-213ENST00000496347 RHOP08100 348 aa17.01■□□□□ 0.31
HDAC4-213ENST00000496347 ADCY1Q08828 1119 aa17.01■□□□□ 0.31
HDAC4-213ENST00000496347 MYBPC2Q14324 1141 aa17.01■□□□□ 0.31
HDAC4-213ENST00000496347 FOXD4L6Q3SYB3 417 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-213ENST00000496347 FOXD4L3Q6VB84 417 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-213ENST00000496347 NPAS3Q8IXF0 933 aa17.01■□□□□ 0.31
HDAC4-213ENST00000496347 ELMOD1Q8N336 334 aa17.01■□□□□ 0.31
HDAC4-213ENST00000496347 TMEM130Q8N3G9 435 aa17.01■□□□□ 0.31
HDAC4-213ENST00000496347 LEMD2Q8NC56 503 aa17.01■□□□□ 0.31
HDAC4-213ENST00000496347 HCFC1R1Q9NWW0 138 aa17.01■□□□□ 0.31
HDAC4-213ENST00000496347 DPP3Q9NY33 737 aa17.01■□□□□ 0.31
HDAC4-213ENST00000496347 RBAKQ9NYW8 714 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-213ENST00000496347 GDE1Q9NZC3 331 aa17.01■□□□□ 0.31
HDAC4-213ENST00000496347 DNMT3BQ9UBC3 853 aaKnown RBP17.01■□□□□ 0.31
HDAC4-213ENST00000496347 FBXL21Q9UKT6 434 aa17.01■□□□□ 0.31
HDAC4-213ENST00000496347 PCDHA7Q9UN72 937 aa17.01■□□□□ 0.31
HDAC4-213ENST00000496347 NUMBLQ9Y6R0 609 aa17.01■□□□□ 0.31
HDAC4-213ENST00000496347 POLR2DO15514 142 aaKnown RBP17■□□□□ 0.31
HDAC4-213ENST00000496347 EXTL3O43909 919 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 CYP11A1P05108 521 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 PNPLA4P41247 253 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 TAF6P49848 677 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 PTPN5P54829 565 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 DNM1Q05193 864 aaKnown RBP17■□□□□ 0.31
HDAC4-213ENST00000496347 PLD1Q13393 1074 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 SV2CQ496J9 727 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 FAM26FQ5R3K3 315 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 ARMCX5Q6P1M9 558 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 SLC44A3Q8N4M1 653 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 ITFG1Q8TB96 612 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 RSAD2Q8WXG1 361 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 SAAL1Q96ER3 474 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 SENP8Q96LD8 212 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 C7orf25Q9BPX7 421 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 CBWD1Q9BRT8 395 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 SLC2A4RGQ9NR83 387 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 WNT16Q9UBV4 365 aa17■□□□□ 0.31
HDAC4-213ENST00000496347 MRPS23Q9Y3D9 190 aaKnown RBP17■□□□□ 0.31
HDAC4-213ENST00000496347 TIMM13Q9Y5L4 95 aaPredicted RBP17■□□□□ 0.31
HDAC4-213ENST00000496347 SPTLC1O15269 473 aa16.99■□□□□ 0.31
HDAC4-213ENST00000496347 NARSO43776 548 aaKnown RBP16.99■□□□□ 0.31
HDAC4-213ENST00000496347 MICAL2O94851 1124 aa16.99■□□□□ 0.31
HDAC4-213ENST00000496347 PRPF6O94906 941 aaKnown RBP16.99■□□□□ 0.31
HDAC4-213ENST00000496347 SEC24AO95486 1093 aa16.99■□□□□ 0.31
HDAC4-213ENST00000496347 AVPR2P30518 371 aa16.99■□□□□ 0.31
HDAC4-213ENST00000496347 CLCN5P51795 746 aa16.99■□□□□ 0.31
HDAC4-213ENST00000496347 NHLH1Q02575 133 aa16.99■□□□□ 0.31
HDAC4-213ENST00000496347 GPR17Q13304 367 aa16.99■□□□□ 0.31
HDAC4-213ENST00000496347 SLC5A9Q2M3M2 681 aa16.99■□□□□ 0.31
HDAC4-213ENST00000496347 CWF19L1Q69YN2 538 aaKnown RBP16.99■□□□□ 0.31
HDAC4-213ENST00000496347 ASTLQ6HA08 431 aaPredicted RBP16.99■□□□□ 0.31
HDAC4-213ENST00000496347 RNF19BQ6ZMZ0 732 aa16.99■□□□□ 0.31
HDAC4-213ENST00000496347 UNC13DQ70J99 1090 aa16.99■□□□□ 0.31
HDAC4-213ENST00000496347 EPM2AIP1Q7L775 607 aaPredicted RBP16.99■□□□□ 0.31
HDAC4-213ENST00000496347 SIX5Q8N196 739 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms