RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 TBC1D7Q9P0N9 293 aa26.26■■□□□ 1.79
HLA-C-209ENST00000495835 OR6C75A6NL08 312 aa26.25■■□□□ 1.79
HLA-C-209ENST00000495835 KIAA0391O15091 583 aaKnown RBP26.25■■□□□ 1.79
HLA-C-209ENST00000495835 CLCN5P51795 746 aa26.25■■□□□ 1.79
HLA-C-209ENST00000495835 ARPP19P56211 112 aa26.25■■□□□ 1.79
HLA-C-209ENST00000495835 KCNA1Q09470 495 aa26.25■■□□□ 1.79
HLA-C-209ENST00000495835 HTR4Q13639 388 aa26.25■■□□□ 1.79
HLA-C-209ENST00000495835 SHC4Q6S5L8 630 aa26.25■■□□□ 1.79
HLA-C-209ENST00000495835 MTSS1LQ765P7 747 aa26.25■■□□□ 1.79
HLA-C-209ENST00000495835 SYCP3Q8IZU3 236 aa26.25■■□□□ 1.79
HLA-C-209ENST00000495835 PYM1Q9BRP8 204 aaKnown RBP26.25■■□□□ 1.79
HLA-C-209ENST00000495835 TRIM9Q9C026 710 aa26.25■■□□□ 1.79
HLA-C-209ENST00000495835 IRF2BPLQ9H1B7 796 aa26.25■■□□□ 1.79
HLA-C-209ENST00000495835 CYP4F11Q9HBI6 524 aa26.25■■□□□ 1.79
HLA-C-209ENST00000495835 NOTCH4Q99466 2003 aa26.25■■□□□ 1.79
HLA-C-209ENST00000495835 MICAL2O94851 1124 aa26.24■■□□□ 1.79
HLA-C-209ENST00000495835 NFICP08651 508 aa26.24■■□□□ 1.79
HLA-C-209ENST00000495835 SRFP11831 508 aa26.24■■□□□ 1.79
HLA-C-209ENST00000495835 ODC1P11926 461 aa26.24■■□□□ 1.79
HLA-C-209ENST00000495835 PTPN5P54829 565 aa26.24■■□□□ 1.79
HLA-C-209ENST00000495835 NTHL1P78549 312 aa26.24■■□□□ 1.79
HLA-C-209ENST00000495835 MYBPC2Q14324 1141 aa26.24■■□□□ 1.79
HLA-C-209ENST00000495835 FGF13Q92913 245 aa26.24■■□□□ 1.79
HLA-C-209ENST00000495835 MFSD1Q9H3U5 465 aa26.24■■□□□ 1.79
HLA-C-209ENST00000495835 INSL5Q9Y5Q6 135 aa26.24■■□□□ 1.79
HLA-C-209ENST00000495835 PDGFBP01127 241 aaPredicted RBP26.23■■□□□ 1.79
HLA-C-209ENST00000495835 CYP11A1P05108 521 aa26.23■■□□□ 1.79
HLA-C-209ENST00000495835 CPB1P15086 417 aa26.23■■□□□ 1.79
HLA-C-209ENST00000495835 GUCY2FP51841 1108 aa26.23■■□□□ 1.79
HLA-C-209ENST00000495835 CASP5P51878 434 aa26.23■■□□□ 1.79
HLA-C-209ENST00000495835 ASTLQ6HA08 431 aaPredicted RBP26.23■■□□□ 1.79
HLA-C-209ENST00000495835 ELMOD1Q8N336 334 aa26.23■■□□□ 1.79
HLA-C-209ENST00000495835 RSAD2Q8WXG1 361 aa26.23■■□□□ 1.79
HLA-C-209ENST00000495835 SENP8Q96LD8 212 aa26.23■■□□□ 1.79
HLA-C-209ENST00000495835 DPP3Q9NY33 737 aa26.23■■□□□ 1.79
HLA-C-209ENST00000495835 FAM13BQ9NYF5 915 aa26.23■■□□□ 1.79
HLA-C-209ENST00000495835 GDE1Q9NZC3 331 aa26.23■■□□□ 1.79
HLA-C-209ENST00000495835 RCOR1Q9UKL0 485 aa26.23■■□□□ 1.79
HLA-C-209ENST00000495835 DSEQ9UL01 958 aa26.23■■□□□ 1.79
HLA-C-209ENST00000495835 ZNF197O14709 1029 aa26.22■■□□□ 1.79
HLA-C-209ENST00000495835 SEC24AO95486 1093 aa26.22■■□□□ 1.79
HLA-C-209ENST00000495835 RHOP08100 348 aa26.22■■□□□ 1.79
HLA-C-209ENST00000495835 VCPP55072 806 aaKnown RBP26.22■■□□□ 1.79
HLA-C-209ENST00000495835 ADCY1Q08828 1119 aa26.22■■□□□ 1.79
HLA-C-209ENST00000495835 GPR17Q13304 367 aa26.22■■□□□ 1.79
HLA-C-209ENST00000495835 IER5LQ5T953 404 aa26.22■■□□□ 1.79
HLA-C-209ENST00000495835 FOXD4L5Q5VV16 416 aaPredicted RBP26.22■■□□□ 1.79
HLA-C-209ENST00000495835 OVOS1Q6IE37 1185 aa26.22■■□□□ 1.79
HLA-C-209ENST00000495835 LEMD2Q8NC56 503 aa26.22■■□□□ 1.79
HLA-C-209ENST00000495835 FOXD4L4Q8WXT5 416 aaPredicted RBP26.22■■□□□ 1.79
HLA-C-209ENST00000495835 C7orf25Q9BPX7 421 aa26.22■■□□□ 1.79
HLA-C-209ENST00000495835 SLC2A4RGQ9NR83 387 aa26.22■■□□□ 1.79
HLA-C-209ENST00000495835 HCFC1R1Q9NWW0 138 aa26.22■■□□□ 1.79
HLA-C-209ENST00000495835 FBXL21Q9UKT6 434 aa26.22■■□□□ 1.79
HLA-C-209ENST00000495835 PCDHA7Q9UN72 937 aa26.22■■□□□ 1.79
HLA-C-209ENST00000495835 MRPS23Q9Y3D9 190 aaKnown RBP26.22■■□□□ 1.79
HLA-C-209ENST00000495835 HOXD11P31277 338 aaPredicted RBP26.21■■□□□ 1.79
HLA-C-209ENST00000495835 ME1P48163 572 aa26.21■■□□□ 1.79
HLA-C-209ENST00000495835 TAF6P49848 677 aa26.21■■□□□ 1.79
HLA-C-209ENST00000495835 NHLH1Q02575 133 aa26.21■■□□□ 1.79
HLA-C-209ENST00000495835 BRSK2Q8IWQ3 736 aa26.21■■□□□ 1.79
HLA-C-209ENST00000495835 ITFG1Q8TB96 612 aa26.21■■□□□ 1.79
HLA-C-209ENST00000495835 CACTINQ8WUQ7 758 aaKnown RBP26.21■■□□□ 1.79
HLA-C-209ENST00000495835 DHX58Q96C10 678 aa26.21■■□□□ 1.79
HLA-C-209ENST00000495835 FAM213AQ9BRX8 229 aa26.21■■□□□ 1.79
HLA-C-209ENST00000495835 IKZF4Q9H2S9 585 aa26.21■■□□□ 1.79
HLA-C-209ENST00000495835 HSFX1Q9UBD0 423 aa26.21■■□□□ 1.79
HLA-C-209ENST00000495835 TIMM13Q9Y5L4 95 aaPredicted RBP26.21■■□□□ 1.79
HLA-C-209ENST00000495835 NUMBLQ9Y6R0 609 aa26.21■■□□□ 1.79
HLA-C-209ENST00000495835 PPEF2O14830 753 aa26.2■■□□□ 1.78
HLA-C-209ENST00000495835 EIF3DO15371 548 aaKnown RBP eCLIP26.2■■□□□ 1.78
HLA-C-209ENST00000495835 EXTL3O43909 919 aa26.2■■□□□ 1.78
HLA-C-209ENST00000495835 PNPLA4P41247 253 aa26.2■■□□□ 1.78
HLA-C-209ENST00000495835 PLD1Q13393 1074 aa26.2■■□□□ 1.78
HLA-C-209ENST00000495835 RESP18Q5W5W9 173 aa26.2■■□□□ 1.78
HLA-C-209ENST00000495835 IQCEQ6IPM2 695 aa26.2■■□□□ 1.78
HLA-C-209ENST00000495835 RNF19BQ6ZMZ0 732 aa26.2■■□□□ 1.78
HLA-C-209ENST00000495835 NPAS3Q8IXF0 933 aa26.2■■□□□ 1.78
HLA-C-209ENST00000495835 TMEM130Q8N3G9 435 aa26.2■■□□□ 1.78
HLA-C-209ENST00000495835 PRSS33Q8NF86 280 aa26.2■■□□□ 1.78
HLA-C-209ENST00000495835 ZNF512Q96ME7 567 aaPredicted RBP26.2■■□□□ 1.78
HLA-C-209ENST00000495835 SCN1AP35498 2009 aa26.2■■□□□ 1.78
HLA-C-209ENST00000495835 SPTLC1O15269 473 aa26.19■■□□□ 1.78
HLA-C-209ENST00000495835 POLR2DO15514 142 aaKnown RBP26.19■■□□□ 1.78
HLA-C-209ENST00000495835 NARSO43776 548 aaKnown RBP26.19■■□□□ 1.78
HLA-C-209ENST00000495835 PRPF6O94906 941 aaKnown RBP26.19■■□□□ 1.78
HLA-C-209ENST00000495835 ARMCX5Q6P1M9 558 aa26.19■■□□□ 1.78
HLA-C-209ENST00000495835 FGF14Q92915 247 aa26.19■■□□□ 1.78
HLA-C-209ENST00000495835 RTP3Q9BQQ7 232 aa26.19■■□□□ 1.78
HLA-C-209ENST00000495835 SNRPFP62306 86 aaKnown RBP26.18■■□□□ 1.78
HLA-C-209ENST00000495835 ASIC1P78348 528 aa26.18■■□□□ 1.78
HLA-C-209ENST00000495835 SMARCB1Q12824 385 aa26.18■■□□□ 1.78
HLA-C-209ENST00000495835 PKP1Q13835 747 aa26.18■■□□□ 1.78
HLA-C-209ENST00000495835 SV2CQ496J9 727 aa26.18■■□□□ 1.78
HLA-C-209ENST00000495835 CYP4A22Q5TCH4 519 aa26.18■■□□□ 1.78
HLA-C-209ENST00000495835 PARM1Q6UWI2 310 aa26.18■■□□□ 1.78
HLA-C-209ENST00000495835 METTL23Q86XA0 190 aa26.18■■□□□ 1.78
HLA-C-209ENST00000495835 EFCAB13Q8IY85 973 aa26.18■■□□□ 1.78
HLA-C-209ENST00000495835 SIX5Q8N196 739 aa26.18■■□□□ 1.78
HLA-C-209ENST00000495835 GPD1LQ8N335 351 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms