RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 SPA17Q15506 151 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 SLC18A3Q16572 532 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 LRRC26Q2I0M4 334 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 WDR72Q3MJ13 1102 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 SCARA3Q6AZY7 606 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 ZNF571Q7Z3V5 609 aaPredicted RBP11.82□□□□□ -0.52
PKP4-215ENST00000494945 RTN4RL1Q86UN2 441 aaPredicted RBP11.82□□□□□ -0.52
PKP4-215ENST00000494945 TXLNBQ8N3L3 684 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 TTC39CQ8N584 583 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 UBR7Q8N806 425 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 GSTCDQ8NEC7 633 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 DBF4BQ8NFT6 615 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 LPPQ93052 612 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 C18orf25Q96B23 403 aaPredicted RBP11.82□□□□□ -0.52
PKP4-215ENST00000494945 ELMO3Q96BJ8 720 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 ZFP42Q96MM3 310 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 GAD1Q99259 594 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 ARID3AQ99856 593 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 DESI2Q9BSY9 194 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 BCO2Q9BYV7 579 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 WNT8AQ9H1J5 351 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 ELAC1Q9H777 363 aaKnown RBP11.82□□□□□ -0.52
PKP4-215ENST00000494945 CYP3A43Q9HB55 503 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 LUC7LQ9NQ29 371 aaKnown RBP11.82□□□□□ -0.52
PKP4-215ENST00000494945 TMEM39AQ9NV64 488 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 ATP8B3O60423 1300 aa11.82□□□□□ -0.52
PKP4-215ENST00000494945 CYP26A1O43174 497 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 KRT5P13647 590 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 CYP2C18P33260 490 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 CLCN1P35523 988 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 TNNC1P63316 161 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 GRIK3Q13003 919 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 C10orf76Q5T2E6 689 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 C17orf53Q8N3J3 647 aaPredicted RBP11.81□□□□□ -0.52
PKP4-215ENST00000494945 RNF169Q8NCN4 708 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 ACRBPQ8NEB7 543 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 SCLYQ96I15 445 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 PPP1R13BQ96KQ4 1090 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 SYT11Q9BT88 431 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 PPP1R12CQ9BZL4 782 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 CISHQ9NSE2 258 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 TMEM161AQ9NX61 479 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 NXF1Q9UBU9 619 aaKnown RBP11.81□□□□□ -0.52
PKP4-215ENST00000494945 PCDHB4Q9Y5E5 795 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 PATJQ8NI35 1801 aa11.81□□□□□ -0.52
PKP4-215ENST00000494945 A0A087X0T9 212 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 USP27XA6NNY8 438 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 ENPP3O14638 875 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 KIAA0355O15063 1070 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 TIMP1P01033 207 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 FAM228BP0C875 321 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 TNFAIP3P21580 790 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 RPL9P32969 192 aaKnown RBP11.8□□□□□ -0.52
PKP4-215ENST00000494945 TAF6P49848 677 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 PDE6CP51160 858 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 SCNN1GP51170 649 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 ZNF132P52740 706 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 CCL23P55773 120 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 SOX4Q06945 474 aaPredicted RBP11.8□□□□□ -0.52
PKP4-215ENST00000494945 NAB2Q15742 525 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 SV2CQ496J9 727 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 CNKSR3Q6P9H4 555 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 TMEM270Q6UE05 265 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 GLB1LQ6UWU2 654 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 ZNF662Q6ZS27 426 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 UBE2Q1Q7Z7E8 422 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 ZNF677Q86XU0 584 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 GPIHBP1Q8IV16 184 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 REXO1L1PQ8IX06 675 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 RBBP8NLQ8NC74 664 aaPredicted RBP11.8□□□□□ -0.52
PKP4-215ENST00000494945 SLC30A5Q8TAD4 765 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 EPS8L1Q8TE68 723 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 RSPH1Q8WYR4 309 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 UROC1Q96N76 676 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 AGPAT1Q99943 283 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.8□□□□□ -0.52
PKP4-215ENST00000494945 MIOSQ9NXC5 875 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 GDAP2Q9NXN4 497 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 NOCTQ9UK39 431 aaKnown RBP11.8□□□□□ -0.52
PKP4-215ENST00000494945 POLIQ9UNA4 740 aa11.8□□□□□ -0.52
PKP4-215ENST00000494945 REXO2Q9Y3B8 237 aaKnown RBP11.8□□□□□ -0.52
PKP4-215ENST00000494945 GBF1Q92538 1859 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 ZNF263O14978 683 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 HOXA2O43364 376 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 WEE2P0C1S8 567 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 CYP11B1P15538 503 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 PAX3P23760 479 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 MAGEA1P43355 309 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 VAV2P52735 878 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 CDR2Q01850 454 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 GFPT1Q06210 699 aaPredicted RBP11.79□□□□□ -0.52
PKP4-215ENST00000494945 INCA1Q0VD86 236 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 TUSC3Q13454 348 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 SCARA5Q6ZMJ2 495 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 KIAA1328Q86T90 577 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 NOP9Q86U38 636 aaKnown RBP11.79□□□□□ -0.52
PKP4-215ENST00000494945 SLC47A2Q86VL8 602 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 TMEM130Q8N3G9 435 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 URGCPQ8TCY9 931 aa11.79□□□□□ -0.52
PKP4-215ENST00000494945 DDX27Q96GQ7 796 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms