RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 DTWD2Q8NBA8 298 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 ZSWIM2Q8NEG5 633 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 RASSF8Q8NHQ8 419 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 FAM84AQ96KN4 292 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 USP28Q96RU2 1077 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 CYP4F11Q9HBI6 524 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 CEP72Q9P209 647 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 DAXXQ9UER7 740 aaPredicted RBP12.67□□□□□ -0.38
VTI1A-208ENST00000494728 CPSF3Q9UKF6 684 aaKnown RBP12.67□□□□□ -0.38
VTI1A-208ENST00000494728 MRPS23Q9Y3D9 190 aaKnown RBP12.67□□□□□ -0.38
VTI1A-208ENST00000494728 ZFP37Q9Y6Q3 630 aaPredicted RBP12.67□□□□□ -0.38
VTI1A-208ENST00000494728 PRR23AA6NEV1 266 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 MYMKA6NI61 221 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 SHISA7A6NL88 538 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 PROB1E7EW31 1015 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 H0YCG3 227 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 PRRG1O14668 218 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 TBCAO75347 108 aaKnown RBP12.66□□□□□ -0.38
VTI1A-208ENST00000494728 LRG1P02750 347 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 KRT18P05783 430 aaKnown RBP12.66□□□□□ -0.38
VTI1A-208ENST00000494728 ACOT2P49753 483 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 CDR1P51861 262 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 CASP5P51878 434 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 ADCY1Q08828 1119 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 ANGPT1Q15389 498 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 TTC9BQ8N6N2 239 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 BEST2Q8NFU1 509 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 DNAJC19Q96DA6 116 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 MCRS1Q96EZ8 462 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 PGLYRP2Q96PD5 576 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 TMEM209Q96SK2 561 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 RTP3Q9BQQ7 232 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 CORO1BQ9BR76 489 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 MSTO1Q9BUK6 570 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 BACH2Q9BYV9 841 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 PLEKHA5Q9HAU0 1116 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 AVENQ9NQS1 362 aaPredicted RBP12.66□□□□□ -0.38
VTI1A-208ENST00000494728 KCNH3Q9ULD8 1083 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 UBQLN1Q9UMX0 589 aaKnown RBP12.66□□□□□ -0.38
VTI1A-208ENST00000494728 YIPF1Q9Y548 306 aa12.66□□□□□ -0.38
VTI1A-208ENST00000494728 SRPRBQ9Y5M8 271 aaKnown RBP12.66□□□□□ -0.38
VTI1A-208ENST00000494728 ZNF638Q14966 1978 aaKnown RBP12.66□□□□□ -0.38
VTI1A-208ENST00000494728 PTPRDP23468 1912 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 H7C4K7 107 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 OAZ2O95190 189 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 CPB1P15086 417 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 GJA1P17302 382 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 CYP3A5P20815 502 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 ADSSP30520 456 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 DDIT3P35638 169 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 YWHAHQ04917 246 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-208ENST00000494728 TWF1Q12792 350 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 SNW1Q13573 536 aaKnown RBP12.65□□□□□ -0.38
VTI1A-208ENST00000494728 SPATA1Q5VX52 437 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 TPGS2Q68CL5 300 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 SCARA3Q6AZY7 606 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 TANGO2Q6ICL3 276 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 CRELD2Q6UXH1 353 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-208ENST00000494728 MTSS1LQ765P7 747 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 RTL10Q7L3V2 364 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 EFCAB13Q8IY85 973 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 PJA1Q8NG27 643 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 OR10T2Q8NGX3 314 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 FAM212AQ96EL1 285 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 ZSWIM3Q96MP5 696 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 STRA6Q9BX79 667 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 DNAJC25Q9H1X3 360 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 RPF1Q9H9Y2 349 aaKnown RBP12.65□□□□□ -0.38
VTI1A-208ENST00000494728 TBC1D7Q9P0N9 293 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 AFF4Q9UHB7 1163 aaKnown RBP12.65□□□□□ -0.38
VTI1A-208ENST00000494728 KCNG1Q9UIX4 513 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 MTF2Q9Y483 593 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-208ENST00000494728 STYXL1Q9Y6J8 313 aa12.65□□□□□ -0.38
VTI1A-208ENST00000494728 GREB1Q4ZG55 1949 aa12.64□□□□□ -0.39
VTI1A-208ENST00000494728 STK25O00506 426 aa12.64□□□□□ -0.39
VTI1A-208ENST00000494728 SOAT2O75908 522 aa12.64□□□□□ -0.39
VTI1A-208ENST00000494728 PTPN2P17706 415 aa12.64□□□□□ -0.39
VTI1A-208ENST00000494728 CD72P21854 359 aa12.64□□□□□ -0.39
VTI1A-208ENST00000494728 LILRA4P59901 499 aa12.64□□□□□ -0.39
VTI1A-208ENST00000494728 FAM78AQ5JUQ0 283 aa12.64□□□□□ -0.39
VTI1A-208ENST00000494728 C9orf57Q5W0N0 161 aa12.64□□□□□ -0.39
VTI1A-208ENST00000494728 PHLDB3Q6NSJ2 640 aa12.64□□□□□ -0.39
VTI1A-208ENST00000494728 ZNF720Q7Z2F6 126 aa12.64□□□□□ -0.39
VTI1A-208ENST00000494728 TMC8Q8IU68 726 aa12.64□□□□□ -0.39
VTI1A-208ENST00000494728 APPL2Q8NEU8 664 aa12.64□□□□□ -0.39
VTI1A-208ENST00000494728 DDX23Q9BUQ8 820 aaKnown RBP12.64□□□□□ -0.39
VTI1A-208ENST00000494728 LRRC3Q9BY71 257 aa12.64□□□□□ -0.39
VTI1A-208ENST00000494728 ST6GALNAC4Q9H4F1 302 aa12.64□□□□□ -0.39
VTI1A-208ENST00000494728 STK17AQ9UEE5 414 aa12.64□□□□□ -0.39
VTI1A-208ENST00000494728 ANAPC1Q9H1A4 1944 aa12.64□□□□□ -0.39
VTI1A-208ENST00000494728 ANO9A1A5B4 782 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 MTMR11A4FU01 709 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 PIRO00625 290 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 PDCP20941 246 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 ELF1P32519 619 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 EPHA5P54756 1037 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 STARD6P59095 220 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 GRM2Q14416 872 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 TMEM132DQ14C87 1099 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 MLF2Q15773 248 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms