RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 SPATA1Q5VX52 437 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 CWF19L1Q69YN2 538 aaKnown RBP10.42□□□□□ -0.74
MSH5-218ENST00000494646 ZNF280DQ6N043 979 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 CCDC73Q6ZRK6 1079 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 MAP4K3Q8IVH8 894 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 ZSWIM2Q8NEG5 633 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 BEST2Q8NFU1 509 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 KCNN1Q92952 543 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 TCEAL4Q96EI5 215 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 PGLYRP2Q96PD5 576 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 KXD1Q9BQD3 176 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 PLA2G2FQ9BZM2 168 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 WNT16Q9UBV4 365 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 STK17AQ9UEE5 414 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 AGO2Q9UKV8 859 aaKnown RBP10.42□□□□□ -0.74
MSH5-218ENST00000494646 ZFP37Q9Y6Q3 630 aaPredicted RBP10.42□□□□□ -0.74
MSH5-218ENST00000494646 ZFHX2Q9C0A1 2572 aaPredicted RBP10.42□□□□□ -0.74
MSH5-218ENST00000494646 PIEZO1Q92508 2521 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 ARHGEF37A1IGU5 675 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 M0QZQ0 153 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 SPTLC1O15269 473 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 GCNT3O95395 438 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 RHOP08100 348 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 NFICP08651 508 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 GJA1P17302 382 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 AOC1P19801 751 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 SCP2P22307 547 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 ADSSP30520 456 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 LILRA4P59901 499 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 YWHAHQ04917 246 aaPredicted RBP10.41□□□□□ -0.74
MSH5-218ENST00000494646 TWF1Q12792 350 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 DUSP4Q13115 394 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 SNW1Q13573 536 aaKnown RBP10.41□□□□□ -0.74
MSH5-218ENST00000494646 C9orf57Q5W0N0 161 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 TPGS2Q68CL5 300 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 SLFN12LQ6IEE8 588 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 CRELD2Q6UXH1 353 aaPredicted RBP10.41□□□□□ -0.74
MSH5-218ENST00000494646 RTL10Q7L3V2 364 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 USP37Q86T82 979 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 CD302Q8IX05 232 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 TCEAL8Q8IYN2 117 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 LINC00301Q8NCQ3 95 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 NOC3LQ8WTT2 800 aaKnown RBP10.41□□□□□ -0.74
MSH5-218ENST00000494646 POMGNT1Q8WZA1 660 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 SENP8Q96LD8 212 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 ZNF512Q96ME7 567 aaPredicted RBP10.41□□□□□ -0.74
MSH5-218ENST00000494646 TMEM209Q96SK2 561 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 ST6GALNAC4Q9H4F1 302 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 PCIF1Q9H4Z3 704 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 PANK4Q9NVE7 773 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 AFF4Q9UHB7 1163 aaKnown RBP10.41□□□□□ -0.74
MSH5-218ENST00000494646 SLC27A5Q9Y2P5 690 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 INSL5Q9Y5Q6 135 aa10.41□□□□□ -0.74
MSH5-218ENST00000494646 GOLGA8IPA6NC78 632 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 GOLGA8JA6NMD2 632 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 PIRO00625 290 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 NRG2O14511 850 aaPredicted RBP10.4□□□□□ -0.74
MSH5-218ENST00000494646 SPTLC2O15270 562 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 PRPF6O94906 941 aaKnown RBP10.4□□□□□ -0.74
MSH5-218ENST00000494646 DCNP07585 359 aaKnown RBP10.4□□□□□ -0.74
MSH5-218ENST00000494646 MYL4P12829 197 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 CEBPBP17676 345 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 ABCD1P33897 745 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 CCR2P41597 374 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 NASPP49321 788 aaPredicted RBP10.4□□□□□ -0.74
MSH5-218ENST00000494646 TMEM132DQ14C87 1099 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 CYP4A22Q5TCH4 519 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 TANGO2Q6ICL3 276 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 MTSS1LQ765P7 747 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 GPIHBP1Q8IV16 184 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 NPAS3Q8IXF0 933 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 SYCP3Q8IZU3 236 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 HPS3Q969F9 1004 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 SNX21Q969T3 373 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 SAAL1Q96ER3 474 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 ZNF396Q96N95 335 aaPredicted RBP10.4□□□□□ -0.74
MSH5-218ENST00000494646 ACCSQ96QU6 501 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 RTP3Q9BQQ7 232 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 FAM213AQ9BRX8 229 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 STRA6Q9BX79 667 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 FGFBP2Q9BYJ0 223 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 CRISPLD1Q9H336 500 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 ASB7Q9H672 318 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 DPP3Q9NY33 737 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 CEP72Q9P209 647 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 KCNH3Q9ULD8 1083 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 PCDHB13Q9Y5F0 798 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 STYXL1Q9Y6J8 313 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 CACNA1HO95180 2353 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 COL4A3Q01955 1670 aa10.4□□□□□ -0.74
MSH5-218ENST00000494646 CACNA1IQ9P0X4 2223 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 MIA3Q5JRA6 1907 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 CYB561D2O14569 222 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 LRRN2O75325 713 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 PPP1R37O75864 691 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 OAZ2O95190 189 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 VNN2O95498 520 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 HSP90AA1P07900 732 aaKnown RBP10.39□□□□□ -0.75
MSH5-218ENST00000494646 POU2F2P09086 479 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 GAP43P17677 238 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms