RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 EPS15L1Q9UBC2 864 aa35.97■■■■□ 3.35
CBX4-203ENST00000494546 KCNH3Q9ULD8 1083 aa35.97■■■■□ 3.35
CBX4-203ENST00000494546 TRIOO75962 3097 aa35.97■■■■□ 3.35
CBX4-203ENST00000494546 PIRO00625 290 aa35.96■■■■□ 3.35
CBX4-203ENST00000494546 LDHAP00338 332 aaKnown RBP35.96■■■■□ 3.35
CBX4-203ENST00000494546 CPB1P15086 417 aa35.96■■■■□ 3.35
CBX4-203ENST00000494546 ATF2P15336 505 aa35.96■■■■□ 3.35
CBX4-203ENST00000494546 AFMP43652 599 aa35.96■■■■□ 3.35
CBX4-203ENST00000494546 TPGS2Q68CL5 300 aa35.96■■■■□ 3.35
CBX4-203ENST00000494546 ARMCX5Q6P1M9 558 aa35.96■■■■□ 3.35
CBX4-203ENST00000494546 EFCAB13Q8IY85 973 aa35.96■■■■□ 3.35
CBX4-203ENST00000494546 HCFC1R1Q9NWW0 138 aa35.96■■■■□ 3.35
CBX4-203ENST00000494546 IGSF9Q9P2J2 1179 aa35.96■■■■□ 3.35
CBX4-203ENST00000494546 ANO9A1A5B4 782 aa35.95■■■■□ 3.35
CBX4-203ENST00000494546 OAZ2O95190 189 aa35.95■■■■□ 3.35
CBX4-203ENST00000494546 LRG1P02750 347 aa35.95■■■■□ 3.35
CBX4-203ENST00000494546 POU2F2P09086 479 aa35.95■■■■□ 3.35
CBX4-203ENST00000494546 KRT85P78386 507 aa35.95■■■■□ 3.35
CBX4-203ENST00000494546 TDGQ13569 410 aa35.95■■■■□ 3.35
CBX4-203ENST00000494546 FAM26FQ5R3K3 315 aa35.95■■■■□ 3.35
CBX4-203ENST00000494546 LEO1Q8WVC0 666 aaPredicted RBP35.95■■■■□ 3.35
CBX4-203ENST00000494546 SENP8Q96LD8 212 aa35.95■■■■□ 3.35
CBX4-203ENST00000494546 SPATA32Q96LK8 384 aa35.95■■■■□ 3.35
CBX4-203ENST00000494546 PYM1Q9BRP8 204 aaKnown RBP35.95■■■■□ 3.35
CBX4-203ENST00000494546 RBAKQ9NYW8 714 aaPredicted RBP35.95■■■■□ 3.35
CBX4-203ENST00000494546 ANK1P16157 1881 aa35.94■■■■□ 3.34
CBX4-203ENST00000494546 SPTLC1O15269 473 aa35.94■■■■□ 3.34
CBX4-203ENST00000494546 LAMP2P13473 410 aa35.94■■■■□ 3.34
CBX4-203ENST00000494546 UNC13DQ70J99 1090 aa35.94■■■■□ 3.34
CBX4-203ENST00000494546 BRSK2Q8IWQ3 736 aa35.94■■■■□ 3.34
CBX4-203ENST00000494546 SUGP1Q8IWZ8 645 aaKnown RBP35.94■■■■□ 3.34
CBX4-203ENST00000494546 CEP57L1Q8IYX8 460 aa35.94■■■■□ 3.34
CBX4-203ENST00000494546 RSAD2Q8WXG1 361 aa35.94■■■■□ 3.34
CBX4-203ENST00000494546 DNMT3BQ9UBC3 853 aaKnown RBP35.94■■■■□ 3.34
CBX4-203ENST00000494546 EXTL3O43909 919 aa35.93■■■■□ 3.34
CBX4-203ENST00000494546 SEC24AO95486 1093 aa35.93■■■■□ 3.34
CBX4-203ENST00000494546 ODC1P11926 461 aa35.93■■■■□ 3.34
CBX4-203ENST00000494546 PAX3P23760 479 aa35.93■■■■□ 3.34
CBX4-203ENST00000494546 WNT7BP56706 349 aa35.93■■■■□ 3.34
CBX4-203ENST00000494546 OVOS1Q6IE37 1185 aa35.93■■■■□ 3.34
CBX4-203ENST00000494546 TCEAL8Q8IYN2 117 aa35.93■■■■□ 3.34
CBX4-203ENST00000494546 FBXL6Q8N531 539 aa35.93■■■■□ 3.34
CBX4-203ENST00000494546 SERTAD1Q9UHV2 236 aa35.93■■■■□ 3.34
CBX4-203ENST00000494546 ARHGEF37A1IGU5 675 aa35.92■■■■□ 3.34
CBX4-203ENST00000494546 TYMPP19971 482 aa35.92■■■■□ 3.34
CBX4-203ENST00000494546 TFAMQ00059 246 aaKnown RBP35.92■■■■□ 3.34
CBX4-203ENST00000494546 ADCY1Q08828 1119 aa35.92■■■■□ 3.34
CBX4-203ENST00000494546 PABPC1LQ4VXU2 614 aaKnown RBP35.92■■■■□ 3.34
CBX4-203ENST00000494546 NT5DC4Q86YG4 428 aa35.92■■■■□ 3.34
CBX4-203ENST00000494546 OXCT2Q9BYC2 517 aaPredicted RBP35.92■■■■□ 3.34
CBX4-203ENST00000494546 AFF4Q9UHB7 1163 aaKnown RBP35.92■■■■□ 3.34
CBX4-203ENST00000494546 EIF3DO15371 548 aaKnown RBP eCLIP35.91■■■■□ 3.34
CBX4-203ENST00000494546 OR4Q2P0C623 313 aa35.91■■■■□ 3.34
CBX4-203ENST00000494546 CUL4BQ13620 913 aa35.91■■■■□ 3.34
CBX4-203ENST00000494546 RNF19BQ6ZMZ0 732 aa35.91■■■■□ 3.34
CBX4-203ENST00000494546 GRAMD1CQ8IYS0 662 aa35.91■■■■□ 3.34
CBX4-203ENST00000494546 GPD1LQ8N335 351 aa35.91■■■■□ 3.34
CBX4-203ENST00000494546 CDH7Q9ULB5 785 aa35.91■■■■□ 3.34
CBX4-203ENST00000494546 INSL5Q9Y5Q6 135 aa35.91■■■■□ 3.34
CBX4-203ENST00000494546 DOCK6Q96HP0 2047 aa35.9■■■■□ 3.34
CBX4-203ENST00000494546 PDGFBP01127 241 aaPredicted RBP35.9■■■■□ 3.34
CBX4-203ENST00000494546 HOXD13P35453 343 aa35.9■■■■□ 3.34
CBX4-203ENST00000494546 TAF6P49848 677 aa35.9■■■■□ 3.34
CBX4-203ENST00000494546 EPM2AIP1Q7L775 607 aaPredicted RBP35.9■■■■□ 3.34
CBX4-203ENST00000494546 ST13P5Q8NFI4 369 aaPredicted RBP35.9■■■■□ 3.34
CBX4-203ENST00000494546 ITFG1Q8TB96 612 aa35.9■■■■□ 3.34
CBX4-203ENST00000494546 ATP6V1DQ9Y5K8 247 aa35.9■■■■□ 3.34
CBX4-203ENST00000494546 A0A1B0GVL5 298 aa35.89■■■■□ 3.34
CBX4-203ENST00000494546 OR6C75A6NL08 312 aa35.89■■■■□ 3.34
CBX4-203ENST00000494546 PFKFB1P16118 471 aa35.89■■■■□ 3.34
CBX4-203ENST00000494546 CMA1P23946 247 aa35.89■■■■□ 3.34
CBX4-203ENST00000494546 BECN1Q14457 450 aa35.89■■■■□ 3.34
CBX4-203ENST00000494546 ZNF507Q8TCN5 953 aa35.89■■■■□ 3.34
CBX4-203ENST00000494546 FGF13Q92913 245 aa35.89■■■■□ 3.34
CBX4-203ENST00000494546 DUSP12Q9UNI6 340 aa35.89■■■■□ 3.34
CBX4-203ENST00000494546 ARIH1Q9Y4X5 557 aaPredicted RBP35.89■■■■□ 3.34
CBX4-203ENST00000494546 ZFP37Q9Y6Q3 630 aaPredicted RBP35.89■■■■□ 3.34
CBX4-203ENST00000494546 KIAA0391O15091 583 aaKnown RBP35.88■■■■□ 3.33
CBX4-203ENST00000494546 RHOP08100 348 aa35.88■■■■□ 3.33
CBX4-203ENST00000494546 SLFN14P0C7P3 912 aa35.88■■■■□ 3.33
CBX4-203ENST00000494546 EHHADHQ08426 723 aa35.88■■■■□ 3.33
CBX4-203ENST00000494546 NELFCDQ8IXH7 590 aa35.88■■■■□ 3.33
CBX4-203ENST00000494546 CACTINQ8WUQ7 758 aaKnown RBP35.88■■■■□ 3.33
CBX4-203ENST00000494546 PGLYRP2Q96PD5 576 aa35.88■■■■□ 3.33
CBX4-203ENST00000494546 PDE11AQ9HCR9 933 aa35.88■■■■□ 3.33
CBX4-203ENST00000494546 MAFFQ9ULX9 164 aa35.88■■■■□ 3.33
CBX4-203ENST00000494546 MRPS23Q9Y3D9 190 aaKnown RBP35.88■■■■□ 3.33
CBX4-203ENST00000494546 DOCK8Q8NF50 2099 aa35.88■■■■□ 3.33
CBX4-203ENST00000494546 PVALEFA0A1B0GWK0 134 aa35.87■■■■□ 3.33
CBX4-203ENST00000494546 CYB561D2O14569 222 aa35.87■■■■□ 3.33
CBX4-203ENST00000494546 ACTN4O43707 911 aaKnown RBP35.87■■■■□ 3.33
CBX4-203ENST00000494546 NARSO43776 548 aaKnown RBP35.87■■■■□ 3.33
CBX4-203ENST00000494546 PTPN2P17706 415 aa35.87■■■■□ 3.33
CBX4-203ENST00000494546 NXPE3Q969Y0 559 aa35.87■■■■□ 3.33
CBX4-203ENST00000494546 FAM84AQ96KN4 292 aa35.87■■■■□ 3.33
CBX4-203ENST00000494546 SLC39A2Q9NP94 309 aa35.87■■■■□ 3.33
CBX4-203ENST00000494546 HTR4Q13639 388 aa35.86■■■■□ 3.33
CBX4-203ENST00000494546 SLC44A3Q8N4M1 653 aa35.86■■■■□ 3.33
CBX4-203ENST00000494546 SCFD1Q8WVM8 642 aa35.86■■■■□ 3.33
CBX4-203ENST00000494546 ING5Q8WYH8 240 aa35.86■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms