RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 TMEM206Q9H813 350 aa14.3□□□□□ -0.12
ERCC3-209ENST00000494464 FAM13BQ9NYF5 915 aa14.3□□□□□ -0.12
ERCC3-209ENST00000494464 WDR27A2RRH5 827 aa14.29□□□□□ -0.12
ERCC3-209ENST00000494464 XYLBO75191 536 aa14.29□□□□□ -0.12
ERCC3-209ENST00000494464 ABLIM3O94929 683 aa14.29□□□□□ -0.12
ERCC3-209ENST00000494464 IL18RAPO95256 599 aa14.29□□□□□ -0.12
ERCC3-209ENST00000494464 ASGR2P07307 311 aa14.29□□□□□ -0.12
ERCC3-209ENST00000494464 GUCY2FP51841 1108 aa14.29□□□□□ -0.12
ERCC3-209ENST00000494464 TPGS2Q68CL5 300 aa14.29□□□□□ -0.12
ERCC3-209ENST00000494464 CRELD2Q6UXH1 353 aaPredicted RBP14.29□□□□□ -0.12
ERCC3-209ENST00000494464 TMEM130Q8N3G9 435 aa14.29□□□□□ -0.12
ERCC3-209ENST00000494464 FAM212AQ96EL1 285 aa14.29□□□□□ -0.12
ERCC3-209ENST00000494464 ASIC4Q96FT7 647 aa14.29□□□□□ -0.12
ERCC3-209ENST00000494464 FUCA2Q9BTY2 467 aa14.29□□□□□ -0.12
ERCC3-209ENST00000494464 OXCT2Q9BYC2 517 aaPredicted RBP14.29□□□□□ -0.12
ERCC3-209ENST00000494464 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.29□□□□□ -0.12
ERCC3-209ENST00000494464 EPS15L1Q9UBC2 864 aa14.29□□□□□ -0.12
ERCC3-209ENST00000494464 LIMD1Q9UGP4 676 aa14.29□□□□□ -0.12
ERCC3-209ENST00000494464 RAPGEFL1Q9UHV5 662 aa14.29□□□□□ -0.12
ERCC3-209ENST00000494464 FBXL5Q9UKA1 691 aa14.29□□□□□ -0.12
ERCC3-209ENST00000494464 ZNF318Q5VUA4 2279 aa14.29□□□□□ -0.12
ERCC3-209ENST00000494464 ANO9A1A5B4 782 aa14.28□□□□□ -0.12
ERCC3-209ENST00000494464 KIAA0391O15091 583 aaKnown RBP14.28□□□□□ -0.12
ERCC3-209ENST00000494464 EIF3DO15371 548 aaKnown RBP eCLIP14.28□□□□□ -0.12
ERCC3-209ENST00000494464 POLR2DO15514 142 aaKnown RBP14.28□□□□□ -0.12
ERCC3-209ENST00000494464 LDHAP00338 332 aaKnown RBP14.28□□□□□ -0.12
ERCC3-209ENST00000494464 ATF2P15336 505 aa14.28□□□□□ -0.12
ERCC3-209ENST00000494464 ASIC1P78348 528 aa14.28□□□□□ -0.12
ERCC3-209ENST00000494464 YWHAHQ04917 246 aaPredicted RBP14.28□□□□□ -0.12
ERCC3-209ENST00000494464 FAM160A1Q05DH4 1040 aa14.28□□□□□ -0.12
ERCC3-209ENST00000494464 CTXN3Q4LDR2 81 aa14.28□□□□□ -0.12
ERCC3-209ENST00000494464 C9orf57Q5W0N0 161 aa14.28□□□□□ -0.12
ERCC3-209ENST00000494464 GET4Q7L5D6 327 aaPredicted RBP14.28□□□□□ -0.12
ERCC3-209ENST00000494464 BRSK2Q8IWQ3 736 aa14.28□□□□□ -0.12
ERCC3-209ENST00000494464 SYCP3Q8IZU3 236 aa14.28□□□□□ -0.12
ERCC3-209ENST00000494464 MFSD14AQ96MC6 490 aa14.28□□□□□ -0.12
ERCC3-209ENST00000494464 MYADMQ96S97 322 aa14.28□□□□□ -0.12
ERCC3-209ENST00000494464 C7orf25Q9BPX7 421 aa14.28□□□□□ -0.12
ERCC3-209ENST00000494464 RBSNQ9H1K0 784 aa14.28□□□□□ -0.12
ERCC3-209ENST00000494464 IGSF9Q9P2J2 1179 aa14.28□□□□□ -0.12
ERCC3-209ENST00000494464 MAFFQ9ULX9 164 aa14.28□□□□□ -0.12
ERCC3-209ENST00000494464 ZFP37Q9Y6Q3 630 aaPredicted RBP14.28□□□□□ -0.12
ERCC3-209ENST00000494464 MYO10Q9HD67 2058 aa14.28□□□□□ -0.12
ERCC3-209ENST00000494464 UBE4BO95155 1302 aa14.28□□□□□ -0.12
ERCC3-209ENST00000494464 ARHGEF37A1IGU5 675 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 PIRO00625 290 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 PPEF2O14830 753 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 CCL16O15467 120 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 PRPF6O94906 941 aaKnown RBP14.27□□□□□ -0.12
ERCC3-209ENST00000494464 OAZ2O95190 189 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 TYMPP19971 482 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 GBP2P32456 591 aaPredicted RBP14.27□□□□□ -0.12
ERCC3-209ENST00000494464 LILRA4P59901 499 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 EHHADHQ08426 723 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 FAM26FQ5R3K3 315 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 UNC13DQ70J99 1090 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 GRASPQ7Z6J2 395 aaPredicted RBP14.27□□□□□ -0.12
ERCC3-209ENST00000494464 EFCAB13Q8IY85 973 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 TCEAL8Q8IYN2 117 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 ENGASEQ8NFI3 743 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 NXPE3Q969Y0 559 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 KCNH6Q9H252 994 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 GOLPH3LQ9H4A5 285 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 DUSP12Q9UNI6 340 aa14.27□□□□□ -0.12
ERCC3-209ENST00000494464 SCN1AP35498 2009 aa14.27□□□□□ -0.13
ERCC3-209ENST00000494464 NOTCH4Q99466 2003 aa14.27□□□□□ -0.13
ERCC3-209ENST00000494464 DOCK6Q96HP0 2047 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 FAM237AA0A1B0GTK4 181 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 EXTL3O43909 919 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 ODC1P11926 461 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 FSHRP23945 695 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 TDGQ13569 410 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 ARMCX5Q6P1M9 558 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 DSTYKQ6XUX3 929 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 EPM2AIP1Q7L775 607 aaPredicted RBP14.26□□□□□ -0.13
ERCC3-209ENST00000494464 USP37Q86T82 979 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 FBXL6Q8N531 539 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 FSIP1Q8NA03 581 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 GLIS3Q8NEA6 775 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 PBXIP1Q96AQ6 731 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 SAAL1Q96ER3 474 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 CBWD1Q9BRT8 395 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 FAM213AQ9BRX8 229 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 KCNK12Q9HB15 430 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 AVENQ9NQS1 362 aaPredicted RBP14.26□□□□□ -0.13
ERCC3-209ENST00000494464 RBAKQ9NYW8 714 aaPredicted RBP14.26□□□□□ -0.13
ERCC3-209ENST00000494464 AFF4Q9UHB7 1163 aaKnown RBP14.26□□□□□ -0.13
ERCC3-209ENST00000494464 KCNH3Q9ULD8 1083 aa14.26□□□□□ -0.13
ERCC3-209ENST00000494464 OR6C75A6NL08 312 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 PRRG1O14668 218 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 SPTLC1O15269 473 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 LRG1P02750 347 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 CYP11A1P05108 521 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 CCDC192P0DO97 292 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 LAMP2P13473 410 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 CPB1P15086 417 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 CMA1P23946 247 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 ELF1P32519 619 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 ARPP19P56211 112 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 SNW1Q13573 536 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms