RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 ARL4CP56559 192 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 SP140Q13342 867 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 CTBP1Q13363 440 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 TIGD6Q17RP2 521 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 PABPC1LQ4VXU2 614 aaKnown RBP4.94□□□□□ -1.62
CMSS1-207ENST00000494412 LMBRD2Q68DH5 695 aaPredicted RBP4.94□□□□□ -1.62
CMSS1-207ENST00000494412 TRIM68Q6AZZ1 485 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 TMEM132EQ6IEE7 984 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 ZNF572Q7Z3I7 529 aaPredicted RBP4.94□□□□□ -1.62
CMSS1-207ENST00000494412 SUGP1Q8IWZ8 645 aaKnown RBP4.94□□□□□ -1.62
CMSS1-207ENST00000494412 NAXEQ8NCW5 288 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 IL17REQ8NFR9 667 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 ZCCHC14Q8WYQ9 949 aaKnown RBP4.94□□□□□ -1.62
CMSS1-207ENST00000494412 SLC38A3Q99624 504 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 MYOCQ99972 504 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 FAM167BQ9BTA0 163 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 PACSIN1Q9BY11 444 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 EIF2AQ9BY44 585 aaKnown RBP4.94□□□□□ -1.62
CMSS1-207ENST00000494412 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 KIAA1683Q9H0B3 1180 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 GCM1Q9NP62 436 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 TM7SF3Q9NS93 570 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 NCDNQ9UBB6 729 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 PCDHA5Q9Y5H7 936 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 SCINQ9Y6U3 715 aa4.94□□□□□ -1.62
CMSS1-207ENST00000494412 PYCARD-AS1I3L0S3 204 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 J3KRW8 73 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 RHOBTB3O94955 611 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 UNC5CO95185 931 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 CNOT4O95628 575 aaKnown RBP4.93□□□□□ -1.62
CMSS1-207ENST00000494412 GNAI2P04899 355 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 MTHFD1P11586 935 aaKnown RBP4.93□□□□□ -1.62
CMSS1-207ENST00000494412 IL1R1P14778 569 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 ALOX15P16050 662 aaPredicted RBP4.93□□□□□ -1.62
CMSS1-207ENST00000494412 SERPINF1P36955 418 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 CASRP41180 1078 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 CASP2P42575 452 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 LIMS1P48059 325 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 EPHB3P54753 998 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 FOXO4P98177 505 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 SPARCL1Q14515 664 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 KIF22Q14807 665 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 ACAP1Q15027 740 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 RAB30Q15771 203 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 JMJD6Q6NYC1 403 aaPredicted RBP4.93□□□□□ -1.62
CMSS1-207ENST00000494412 CNKSR3Q6P9H4 555 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 CATSPERGQ6ZRH7 1159 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 RSRC2Q7L4I2 434 aaKnown RBP4.93□□□□□ -1.62
CMSS1-207ENST00000494412 GALNT15Q8N3T1 639 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 SDR16C5Q8N3Y7 309 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 CCDC150Q8NCX0 1101 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 NUDT10Q8NFP7 164 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 OR5M3Q8NGP4 307 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 STYXQ8WUJ0 223 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 IPCEF1Q8WWN9 437 aaPredicted RBP4.93□□□□□ -1.62
CMSS1-207ENST00000494412 SLC7A6OSQ96CW6 309 aaPredicted RBP4.93□□□□□ -1.62
CMSS1-207ENST00000494412 NUDT11Q96G61 164 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 PPM1MQ96MI6 270 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 KATNBL1Q9H079 304 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 BRD9Q9H8M2 597 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 GOLGA2P5Q9HBQ8 144 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 VPS45Q9NRW7 570 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 CFAP97Q9P2B7 532 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 PDP2Q9P2J9 529 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 MBD1Q9UIS9 605 aaPredicted RBP4.93□□□□□ -1.62
CMSS1-207ENST00000494412 HDAC9Q9UKV0 1011 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 CRYL1Q9Y2S2 319 aa4.93□□□□□ -1.62
CMSS1-207ENST00000494412 CTDP1Q9Y5B0 961 aaPredicted RBP4.93□□□□□ -1.62
CMSS1-207ENST00000494412 KAT6BQ8WYB5 2073 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 TEX51A0A1B0GUA7 166 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 TCRBV7S2A1N4TA0A589 114 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 MBD3L4A6NDZ8 208 aaPredicted RBP4.92□□□□□ -1.62
CMSS1-207ENST00000494412 MBD3L3A6NE82 208 aaPredicted RBP4.92□□□□□ -1.62
CMSS1-207ENST00000494412 PRSS29PA6NIE9 313 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 CLCA1A8K7I4 914 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 MYO1CO00159 1063 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 NRP1O14786 923 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 PIP5K1BO14986 540 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 MTSS1O43312 755 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 PEX10O60683 326 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 RASSF9O75901 435 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 TNFRSF6BO95407 300 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 GJB1P08034 283 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 RARBP10826 455 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 ATP5JP18859 108 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 IGFBP6P24592 240 aaPredicted RBP4.92□□□□□ -1.62
CMSS1-207ENST00000494412 KLRC1P26715 233 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 IL13P35225 146 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 BPIFB4P59827 614 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 PSMC1P62191 440 aaKnown RBP4.92□□□□□ -1.62
CMSS1-207ENST00000494412 DLG4P78352 724 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 APBA1Q02410 837 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 PTH1RQ03431 593 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 FOXO1Q12778 655 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 G3BP1Q13283 466 aaKnown RBP eCLIP4.92□□□□□ -1.62
CMSS1-207ENST00000494412 CNGB1Q14028 1251 aaPredicted RBP4.92□□□□□ -1.62
CMSS1-207ENST00000494412 MFSD14BQ5SR56 506 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 DCAF12L1Q5VU92 463 aa4.92□□□□□ -1.62
CMSS1-207ENST00000494412 ATG14Q6ZNE5 492 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms