RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 TNPO1Q92973 898 aaKnown RBP5.16□□□□□ -1.58
GTF3A-208ENST00000493903 KATNAL1Q9BW62 490 aa5.16□□□□□ -1.58
GTF3A-208ENST00000493903 C1orf43Q9BWL3 253 aa5.16□□□□□ -1.58
GTF3A-208ENST00000493903 CHST8Q9H2A9 424 aa5.16□□□□□ -1.58
GTF3A-208ENST00000493903 JMJD4Q9H9V9 463 aa5.16□□□□□ -1.58
GTF3A-208ENST00000493903 BLOC1S4Q9NUP1 217 aa5.16□□□□□ -1.58
GTF3A-208ENST00000493903 RGL1Q9NZL6 768 aa5.16□□□□□ -1.58
GTF3A-208ENST00000493903 KIF17Q9P2E2 1029 aa5.16□□□□□ -1.58
GTF3A-208ENST00000493903 KLHL14Q9P2G3 628 aa5.16□□□□□ -1.58
GTF3A-208ENST00000493903 ZNF212Q9UDV6 495 aa5.16□□□□□ -1.58
GTF3A-208ENST00000493903 AJAP1Q9UKB5 411 aaPredicted RBP5.16□□□□□ -1.58
GTF3A-208ENST00000493903 HDAC9Q9UKV0 1011 aa5.16□□□□□ -1.58
GTF3A-208ENST00000493903 HCFC2Q9Y5Z7 792 aa5.16□□□□□ -1.58
GTF3A-208ENST00000493903 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.16□□□□□ -1.58
GTF3A-208ENST00000493903 B4E171 279 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 F5H0A9 414 aaPredicted RBP5.15□□□□□ -1.59
GTF3A-208ENST00000493903 H0Y858 1186 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 PYCARD-AS1I3L0S3 204 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 FAM155BO75949 473 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 INMTO95050 263 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 CD1AP06126 327 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 GNAI3P08754 354 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 TXNP10599 105 aaKnown RBP5.15□□□□□ -1.59
GTF3A-208ENST00000493903 HNRNPLP14866 589 aaKnown RBP eCLIP5.15□□□□□ -1.59
GTF3A-208ENST00000493903 GYPEP15421 78 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 GABRB3P28472 473 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 TSPAN7P41732 249 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 PAPOLAP51003 745 aaKnown RBP5.15□□□□□ -1.59
GTF3A-208ENST00000493903 COPAP53621 1224 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 GNAI1P63096 354 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 YBX1P67809 324 aaKnown RBP5.15□□□□□ -1.59
GTF3A-208ENST00000493903 POU6F2P78424 691 aaPredicted RBP5.15□□□□□ -1.59
GTF3A-208ENST00000493903 CREMQ03060 361 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 EXOSC9Q06265 439 aaKnown RBP5.15□□□□□ -1.59
GTF3A-208ENST00000493903 EIF4HQ15056 248 aaKnown RBP5.15□□□□□ -1.59
GTF3A-208ENST00000493903 KCNMB1Q16558 191 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 NBPF8Q3BBV2 869 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 PABPC1LQ4VXU2 614 aaKnown RBP5.15□□□□□ -1.59
GTF3A-208ENST00000493903 SPATA1Q5VX52 437 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 LMBRD2Q68DH5 695 aaPredicted RBP5.15□□□□□ -1.59
GTF3A-208ENST00000493903 KRT28Q7Z3Y7 464 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 GATAD2AQ86YP4 633 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 PLXDC1Q8IUK5 500 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 YAF2Q8IY57 180 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 TRMT2AQ8IZ69 625 aaKnown RBP5.15□□□□□ -1.59
GTF3A-208ENST00000493903 STPG3Q8N7X2 389 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 IL17RDQ8NFM7 739 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 OTUD7AQ8TE49 926 aaPredicted RBP5.15□□□□□ -1.59
GTF3A-208ENST00000493903 HERVK_113Q902F9 699 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 KIRREL1Q96J84 757 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 SNX27Q96L92 541 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 CLIC6Q96NY7 704 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 KRTAP4-8Q9BYQ9 185 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 C11orf54Q9H0W9 315 aaPredicted RBP5.15□□□□□ -1.59
GTF3A-208ENST00000493903 RIC8AQ9NPQ8 531 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 TLR9Q9NR96 1032 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.15□□□□□ -1.59
GTF3A-208ENST00000493903 USP40Q9NVE5 1235 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 GGA3Q9NZ52 723 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 MOCS1Q9NZB8 636 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 CFAP97Q9P2B7 532 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 HERC5Q9UII4 1024 aaKnown RBP5.15□□□□□ -1.59
GTF3A-208ENST00000493903 MAGEL2Q9UJ55 1249 aa5.15□□□□□ -1.59
GTF3A-208ENST00000493903 A0A087WWL8 130 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 CCDC196A0A1B0GTZ2 297 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 ZNF503-AS2A6NEH8 195 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 A6NLC8 198 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 AQP12BA6NM10 295 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 HRKO00198 91 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 KCNQ3O43525 872 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 CYP7B1O75881 506 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 SOAT2O75908 522 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 ALDH1A2O94788 518 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 POLBP06746 335 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 C8BP07358 591 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 ITGA2BP08514 1039 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 CYP2C8P10632 490 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 MTHFD1P11586 935 aaKnown RBP5.14□□□□□ -1.59
GTF3A-208ENST00000493903 NCAM1P13591 858 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 IL1R1P14778 569 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 CST5P28325 142 aaPredicted RBP5.14□□□□□ -1.59
GTF3A-208ENST00000493903 PCSK1P29120 753 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 VAMP2P63027 116 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 ZNF200P98182 395 aaPredicted RBP5.14□□□□□ -1.59
GTF3A-208ENST00000493903 CTBP1Q13363 440 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 ADGRF1Q5T601 910 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 ANKRD45Q5TZF3 282 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 ZNF572Q7Z3I7 529 aaPredicted RBP5.14□□□□□ -1.59
GTF3A-208ENST00000493903 CLEC14AQ86T13 490 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 FTSJ3Q8IY81 847 aaKnown RBP5.14□□□□□ -1.59
GTF3A-208ENST00000493903 LILRA3Q8N6C8 439 aaPredicted RBP5.14□□□□□ -1.59
GTF3A-208ENST00000493903 GLIS1Q8NBF1 620 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 IPO4Q8TEX9 1081 aaKnown RBP5.14□□□□□ -1.59
GTF3A-208ENST00000493903 STYXQ8WUJ0 223 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 RUBCNQ92622 972 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 DDX17Q92841 729 aaKnown RBP5.14□□□□□ -1.59
GTF3A-208ENST00000493903 SDCCAG3Q96C92 435 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 SERINC2Q96SA4 455 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 STK31Q9BXU1 1019 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 BCAS3Q9H6U6 928 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms