RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 COL19A1Q14993 1142 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 CDKAL1Q5VV42 579 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 C1orf146Q5VVC0 180 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 CYB5R4Q7L1T6 521 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 LPCAT2Q7L5N7 544 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 ADAT2Q7Z6V5 191 aaKnown RBP7.23□□□□□ -1.25
VPS13B-205ENST00000493587 KBTBD3Q8NAB2 608 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 HIPK4Q8NE63 616 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 OR6Y1Q8NGX8 325 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 ZFP28Q8NHY6 868 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 PPP1R14CQ8TAE6 165 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 HELQQ8TDG4 1101 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 JDP2Q8WYK2 163 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 EDC3Q96F86 508 aaKnown RBP7.23□□□□□ -1.25
VPS13B-205ENST00000493587 SETDB2Q96T68 719 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 DBNDD2Q9BQY9 259 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 CELF4Q9BZC1 486 aaKnown RBP7.23□□□□□ -1.25
VPS13B-205ENST00000493587 BLZF1Q9H2G9 400 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 MMRN2Q9H8L6 949 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 UBN1Q9NPG3 1134 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 C8orf4Q9NR00 106 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 TBC1D14Q9P2M4 693 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 TMCC3Q9ULS5 477 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 CAPN11Q9UMQ6 739 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 SPATA31A6Q5VVP1 1343 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 SLX4Q8IY92 1834 aa7.23□□□□□ -1.25
VPS13B-205ENST00000493587 C15orf38-AP3S2A0A0A6YYH1 394 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 TNPO2O14787 897 aaKnown RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 PTGS2P35354 604 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 MAP3K10Q02779 954 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 PDE4DQ08499 809 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 SCARF1Q14162 830 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 DCAF6Q58WW2 860 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 OGFOD2Q6N063 350 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 ARPINQ7Z6K5 226 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 SAMD14Q8IZD0 417 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 DEPDC4Q8N2C3 294 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 C12orf50Q8NA57 414 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 GRAMD1AQ96CP6 724 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 OTUD5Q96G74 571 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 ZNF594Q96JF6 807 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 DNAJC7Q99615 494 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 NEURL2Q9BR09 285 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 TRIM51Q9BSJ1 452 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 OSBPL6Q9BZF3 934 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 TMEM60Q9H2L4 133 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 TMEM206Q9H813 350 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 TYW1Q9NV66 732 aaKnown RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 GPRC5DQ9NZD1 345 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 DCTN4Q9UJW0 460 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 RPL26L1Q9UNX3 145 aaKnown RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 SNX9Q9Y5X1 595 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 MAST3O60307 1309 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 GRID2IPA4D2P6 1211 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 UBAP1LF5GYI3 381 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 EYA2O00167 538 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 CASQ2O14958 399 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 XPO1O14980 1071 aaKnown RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 PRPF3O43395 683 aaKnown RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 KLHL41O60662 606 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 PARNO95453 639 aaKnown RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 ESRRBO95718 433 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 FUCA1P04066 466 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 EIF2S1P05198 315 aaKnown RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 ANPEPP15144 967 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 CRKLP46109 303 aaKnown RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 YWHAGP61981 247 aaKnown RBP eCLIP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 IL9RQ01113 521 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 MKRN3Q13064 507 aaKnown RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 DNAJC3Q13217 504 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 BOLA3Q53S33 107 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 PCNX4Q63HM2 1172 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 ARHGEF18Q6ZSZ5 1173 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 ZNF572Q7Z3I7 529 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 NELFCDQ8IXH7 590 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 USP38Q8NB14 1042 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 LINC00116Q8NCU8 138 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 ICA1LQ8NDH6 482 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 APPL2Q8NEU8 664 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 EXD1Q8NHP7 514 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 RIN3Q8TB24 985 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 MED30Q96HR3 178 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 CYLDQ9NQC7 956 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 FAM207AQ9NSI2 230 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 STK32BQ9NY57 414 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 LIMA1Q9UHB6 759 aaKnown RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 HPS5Q9UPZ3 1129 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 SCN9AQ15858 1988 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 GOLGB1Q14789 3259 aaKnown RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 LOC102724428A0A0B4J2F2 783 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 LOC105371267A0A1B0GV96 52 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 H3BSA7 217 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 GOLGA8MH3BSY2 632 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 H3BUI4 141 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 CDK2AP1O14519 115 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 NTSR2O95665 410 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 KRT13P13646 458 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 FDPSP14324 419 aaKnown RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 ATP5DP30049 168 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 ACADSBP45954 432 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms