RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 FMR1Q06787 632 aaKnown RBP eCLIP17.1■□□□□ 0.33
BRAT1-206ENST00000493232 STK4Q13043 487 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 MTF1Q14872 753 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 PRUNE1Q86TP1 453 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 TAGAPQ8N103 731 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 SGSM3Q96HU1 749 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 OLFML3Q9NRN5 406 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 CNTNAP5Q8WYK1 1306 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 GTPBP10A4D1E9 387 aaKnown RBP17.09■□□□□ 0.33
BRAT1-206ENST00000493232 RALBP11234 206 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 ARHGEF7Q14155 803 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 MTFR1Q15390 333 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 WDR24Q96S15 920 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 NEU2Q9Y3R4 380 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 SPHKAPQ2M3C7 1700 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 GPD1P21695 349 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 SPRP35270 261 aaPredicted RBP17.09■□□□□ 0.33
BRAT1-206ENST00000493232 ZNF200P98182 395 aaPredicted RBP17.09■□□□□ 0.33
BRAT1-206ENST00000493232 USP10Q14694 798 aaKnown RBP17.09■□□□□ 0.33
BRAT1-206ENST00000493232 NOTUMQ6P988 496 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 ARHGAP18Q8N392 663 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 PABPC5Q96DU9 382 aaKnown RBP17.09■□□□□ 0.33
BRAT1-206ENST00000493232 RANBP17Q9H2T7 1088 aaKnown RBP17.09■□□□□ 0.33
BRAT1-206ENST00000493232 FHOD1Q9Y613 1164 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 PRRG1O14668 218 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 CENPCQ03188 943 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 NR1I3Q14994 352 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 SKIV2LQ15477 1246 aaKnown RBP17.09■□□□□ 0.33
BRAT1-206ENST00000493232 IL31Q6EBC2 164 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 OLFM3Q96PB7 478 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 CNTNAP4Q9C0A0 1308 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 GPR75-ASB3A0A0A6YYF3 556 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 CFAP99D6REC4 459 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 PSMD14O00487 310 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 PDGFRBP09619 1106 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 CPT1AP50416 773 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 STX3Q13277 289 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 SMAD1Q15797 465 aaKnown RBP17.09■□□□□ 0.33
BRAT1-206ENST00000493232 ELOA2Q8IYF1 753 aaPredicted RBP17.09■□□□□ 0.33
BRAT1-206ENST00000493232 STX19Q8N4C7 294 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 SYN2Q92777 582 aaPredicted RBP17.09■□□□□ 0.33
BRAT1-206ENST00000493232 ELMO2Q96JJ3 720 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 MUC3BQ9H195 1237 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.09■□□□□ 0.33
BRAT1-206ENST00000493232 SPATA31A1Q5TZJ5 1347 aa17.09■□□□□ 0.33
BRAT1-206ENST00000493232 SYF2O95926 243 aaKnown RBP17.08■□□□□ 0.33
BRAT1-206ENST00000493232 RGS4P49798 205 aa17.08■□□□□ 0.33
BRAT1-206ENST00000493232 PLA2G4FQ68DD2 849 aa17.08■□□□□ 0.33
BRAT1-206ENST00000493232 EFCAB12Q6NXP0 572 aa17.08■□□□□ 0.33
BRAT1-206ENST00000493232 CHP1Q99653 195 aa17.08■□□□□ 0.33
BRAT1-206ENST00000493232 OCM2P0CE71 109 aa17.08■□□□□ 0.33
BRAT1-206ENST00000493232 OCMP0CE72 109 aaPredicted RBP17.08■□□□□ 0.33
BRAT1-206ENST00000493232 KDELC2Q7Z4H8 507 aa17.08■□□□□ 0.33
BRAT1-206ENST00000493232 LINC00116Q8NCU8 138 aa17.08■□□□□ 0.33
BRAT1-206ENST00000493232 AGBL3Q8NEM8 1001 aa17.08■□□□□ 0.33
BRAT1-206ENST00000493232 FRMD8Q9BZ67 464 aaPredicted RBP17.08■□□□□ 0.33
BRAT1-206ENST00000493232 OSBPL8Q9BZF1 889 aa17.08■□□□□ 0.33
BRAT1-206ENST00000493232 SH3BP1Q9Y3L3 701 aa17.08■□□□□ 0.33
BRAT1-206ENST00000493232 QRICH2Q9H0J4 1663 aa17.08■□□□□ 0.32
BRAT1-206ENST00000493232 UNC13BO14795 1591 aa17.08■□□□□ 0.32
BRAT1-206ENST00000493232 SYNDIG1LA6NDD5 238 aa17.08■□□□□ 0.32
BRAT1-206ENST00000493232 SPDYE5A6NIY4 337 aa17.08■□□□□ 0.32
BRAT1-206ENST00000493232 CYP2C8P10632 490 aa17.08■□□□□ 0.32
BRAT1-206ENST00000493232 CDH2P19022 906 aaPredicted RBP17.08■□□□□ 0.32
BRAT1-206ENST00000493232 SPDYE7PQ495Y7 208 aa17.08■□□□□ 0.32
BRAT1-206ENST00000493232 DNAL1Q4LDG9 190 aa17.08■□□□□ 0.32
BRAT1-206ENST00000493232 SEPT5Q99719 369 aaPredicted RBP17.08■□□□□ 0.32
BRAT1-206ENST00000493232 MYOZ2Q9NPC6 264 aa17.08■□□□□ 0.32
BRAT1-206ENST00000493232 SETBP1Q9Y6X0 1596 aa17.08■□□□□ 0.32
BRAT1-206ENST00000493232 CD163L1Q9NR16 1453 aa17.08■□□□□ 0.32
BRAT1-206ENST00000493232 C5orf58C9J3I9 102 aa17.08■□□□□ 0.32
BRAT1-206ENST00000493232 ZSCAN9O15535 394 aaPredicted RBP17.08■□□□□ 0.32
BRAT1-206ENST00000493232 CYP2B6P20813 491 aa17.08■□□□□ 0.32
BRAT1-206ENST00000493232 MUTP22033 750 aa17.08■□□□□ 0.32
BRAT1-206ENST00000493232 PGM1P36871 562 aa17.08■□□□□ 0.32
BRAT1-206ENST00000493232 LRRC23Q53EV4 343 aaPredicted RBP17.08■□□□□ 0.32
BRAT1-206ENST00000493232 GRAMD4Q6IC98 578 aa17.08■□□□□ 0.32
BRAT1-206ENST00000493232 CEP70Q8NHQ1 597 aa17.08■□□□□ 0.32
BRAT1-206ENST00000493232 EPB41L4AQ9HCS5 686 aaPredicted RBP17.08■□□□□ 0.32
BRAT1-206ENST00000493232 MAPRE1Q15691 268 aaKnown RBP17.07■□□□□ 0.32
BRAT1-206ENST00000493232 ACBD5Q5T8D3 534 aaPredicted RBP17.07■□□□□ 0.32
BRAT1-206ENST00000493232 ANKRD13AQ8IZ07 590 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 ARL8AQ96BM9 186 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 SH2D3AQ9BRG2 576 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 CCL15-CCL14A0A0B4J2E2 113 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 VSNL1P62760 191 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 CCL15Q16663 113 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 C16orf87Q6PH81 154 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 BARGINQ6ZT62 677 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 CLEC10AQ8IUN9 316 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 DAGLBQ8NCG7 672 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 USP33Q8TEY7 942 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 LBHD1Q9BQE6 289 aaPredicted RBP17.07■□□□□ 0.32
BRAT1-206ENST00000493232 PPP1R37O75864 691 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 GMPSP49915 693 aaPredicted RBP17.07■□□□□ 0.32
BRAT1-206ENST00000493232 AGR3Q8TD06 166 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 LATS2Q9NRM7 1088 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 SELENONQ9NZV5 590 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 TCP11X1B4DZS4 312 aa17.07■□□□□ 0.32
BRAT1-206ENST00000493232 POLBP06746 335 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms