RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 EFHC1Q5JVL4 640 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 MTMR12Q9C0I1 747 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 MRPL17Q9NRX2 175 aaKnown RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 SEPT10Q9P0V9 454 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 CNOT8Q9UFF9 292 aaKnown RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 CAPN11Q9UMQ6 739 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 SH3BP1Q9Y3L3 701 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 FARP1Q9Y4F1 1045 aaPredicted RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 MYH7P12883 1935 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 FAM237AA0A1B0GTK4 181 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 TRIM66O15016 1216 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 BUB1O43683 1085 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 ITGBL1O95965 494 aaPredicted RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 DARSP14868 501 aaKnown RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 ZFXP17010 805 aaPredicted RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 YWHAHQ04917 246 aaPredicted RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 POU5F1BQ06416 359 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 RNF187Q5TA31 235 aaPredicted RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 ALKBH5Q6P6C2 394 aaKnown RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 MAATS1Q7Z4T9 603 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 GAS2L1Q99501 681 aaPredicted RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 ARHGAP39Q9C0H5 1083 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 BLOC1S4Q9NUP1 217 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 COL11A2P13942 1736 aaPredicted RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 SF3B1O75533 1304 aaKnown RBP eCLIP6.67□□□□□ -1.349e-7■■■■■ 79.4
NF1-215ENST00000493220 A0A1W2PQ45 241 aaPredicted RBP6.66□□□□□ -1.34
NF1-215ENST00000493220 A0A1W2PQY0 241 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 CCNE2O96020 404 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 CXCL8P10145 99 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 ZNF18P17022 549 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 CD52P31358 61 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 CTNNB1P35222 781 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 GJA5P36382 358 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 SULT1E1P49888 294 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 NR1H3Q13133 447 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 UGCGQ16739 394 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 HSDL1Q3SXM5 330 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 NT5DC1Q5TFE4 455 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 C8orf74Q6P047 294 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 CNKSR3Q6P9H4 555 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 TMC7Q7Z402 723 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 FBXO22Q8NEZ5 403 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 GABRQQ9UN88 632 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 PCDHB5Q9Y5E4 795 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 A0A1B0GTH6 734 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 GTPBP10A4D1E9 387 aaKnown RBP6.66□□□□□ -1.34
NF1-215ENST00000493220 H3BRJ5 948 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 KCNK3O14649 394 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 SLU7O95391 586 aaKnown RBP6.66□□□□□ -1.34
NF1-215ENST00000493220 KRT7P08729 469 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 SPATA31C1P0DKV0 1188 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 SLC2A3P11169 496 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 KLRC2P26717 231 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 ATP5DP30049 168 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 SLC1A1P43005 524 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 RECQLP46063 649 aaPredicted RBP6.66□□□□□ -1.34
NF1-215ENST00000493220 SOX10P56693 466 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 BIRC2Q13490 618 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 RAB30Q15771 203 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 E2F4Q16254 413 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 PREPLQ4J6C6 727 aaPredicted RBP6.66□□□□□ -1.34
NF1-215ENST00000493220 CROCCP2Q86T23 111 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 GPIHBP1Q8IV16 184 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 IFT20Q8IY31 132 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 RNPEPQ9H4A4 650 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 TJP2Q9UDY2 1190 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 MIF4GDA9UHW6 222 aaKnown RBP6.66□□□□□ -1.34
NF1-215ENST00000493220 H7C0C1 242 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 STK25O00506 426 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 EOMESO95936 686 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 POMCP01189 267 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 ATP5OP48047 213 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 GLRA4Q5JXX5 417 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 JADE1Q6IE81 842 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 DCLRE1AQ6PJP8 1040 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 PPP1R21Q6ZMI0 780 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 SLC24A5Q71RS6 500 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 ANO5Q75V66 913 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 TRAPPC11Q7Z392 1133 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 RNPC3Q96LT9 517 aaKnown RBP6.66□□□□□ -1.34
NF1-215ENST00000493220 ZNF512Q96ME7 567 aaPredicted RBP6.66□□□□□ -1.34
NF1-215ENST00000493220 IQCGQ9H095 443 aaKnown RBP6.66□□□□□ -1.34
NF1-215ENST00000493220 UNC93B1Q9H1C4 597 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 RNF14Q9UBS8 474 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 ASIC3Q9UHC3 531 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 SAR1BQ9Y6B6 198 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 CASTOR2A6NHX0 329 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 LACTBL1A8MY62 500 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 RTN3O95197 1032 aaPredicted RBP6.66□□□□□ -1.34
NF1-215ENST00000493220 NDUFA10O95299 355 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 PDGFRBP09619 1106 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 FGFR4P22455 802 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 ARL2P36404 184 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 COBLL1Q53SF7 1204 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 FAM102AQ5T9C2 384 aaPredicted RBP6.66□□□□□ -1.34
NF1-215ENST00000493220 FOXR2Q6PJQ5 311 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 CBWD2Q8IUF1 395 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 NPAS4Q8IUM7 802 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 PASD1Q8IV76 773 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms