RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 C2CD2Q9Y426 696 aa19.54■□□□□ 0.72
PTPRU-207ENST00000492954 ANO9A1A5B4 782 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 SPTLC1O15269 473 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 PRPF6O94906 941 aaKnown RBP19.53■□□□□ 0.72
PTPRU-207ENST00000492954 OAZ2O95190 189 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 RHOP08100 348 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 CPB1P15086 417 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 NHLH1Q02575 133 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 ADCY1Q08828 1119 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 ALCAMQ13740 583 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 RNF19BQ6ZMZ0 732 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 USP37Q86T82 979 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 EFCAB13Q8IY85 973 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 SYCP3Q8IZU3 236 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 ING5Q8WYH8 240 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 HPS3Q969F9 1004 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 SAAL1Q96ER3 474 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 FAM213AQ9BRX8 229 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 MFSD1Q9H3U5 465 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 CUEDC2Q9H467 287 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 AFF4Q9UHB7 1163 aaKnown RBP19.53■□□□□ 0.72
PTPRU-207ENST00000492954 INSL5Q9Y5Q6 135 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 ZFP37Q9Y6Q3 630 aaPredicted RBP19.53■□□□□ 0.72
PTPRU-207ENST00000492954 NUMBLQ9Y6R0 609 aa19.53■□□□□ 0.72
PTPRU-207ENST00000492954 PIRO00625 290 aa19.52■□□□□ 0.72
PTPRU-207ENST00000492954 CFHP08603 1231 aa19.52■□□□□ 0.72
PTPRU-207ENST00000492954 OR4Q2P0C623 313 aa19.52■□□□□ 0.72
PTPRU-207ENST00000492954 ME1P48163 572 aa19.52■□□□□ 0.72
PTPRU-207ENST00000492954 WNT7BP56706 349 aa19.52■□□□□ 0.72
PTPRU-207ENST00000492954 POU5F1Q01860 360 aaKnown RBP19.52■□□□□ 0.72
PTPRU-207ENST00000492954 DNM1Q05193 864 aaKnown RBP19.52■□□□□ 0.72
PTPRU-207ENST00000492954 SLC5A9Q2M3M2 681 aa19.52■□□□□ 0.72
PTPRU-207ENST00000492954 PARM1Q6UWI2 310 aa19.52■□□□□ 0.72
PTPRU-207ENST00000492954 SIX5Q8N196 739 aa19.52■□□□□ 0.72
PTPRU-207ENST00000492954 IQUBQ8NA54 791 aa19.52■□□□□ 0.72
PTPRU-207ENST00000492954 GLIS3Q8NEA6 775 aa19.52■□□□□ 0.72
PTPRU-207ENST00000492954 FGF14Q92915 247 aa19.52■□□□□ 0.72
PTPRU-207ENST00000492954 SENP8Q96LD8 212 aa19.52■□□□□ 0.72
PTPRU-207ENST00000492954 TRIM9Q9C026 710 aa19.52■□□□□ 0.72
PTPRU-207ENST00000492954 LRRC27Q9C0I9 530 aa19.52■□□□□ 0.72
PTPRU-207ENST00000492954 DPP3Q9NY33 737 aa19.52■□□□□ 0.72
PTPRU-207ENST00000492954 KCNH3Q9ULD8 1083 aa19.52■□□□□ 0.72
PTPRU-207ENST00000492954 MRPS23Q9Y3D9 190 aaKnown RBP19.52■□□□□ 0.72
PTPRU-207ENST00000492954 PIEZO1Q92508 2521 aa19.52■□□□□ 0.71
PTPRU-207ENST00000492954 KMT2EQ8IZD2 1858 aa19.52■□□□□ 0.71
PTPRU-207ENST00000492954 TULP1O00294 542 aaPredicted RBP19.51■□□□□ 0.71
PTPRU-207ENST00000492954 POLR2DO15514 142 aaKnown RBP19.51■□□□□ 0.71
PTPRU-207ENST00000492954 IL18RAPO95256 599 aa19.51■□□□□ 0.71
PTPRU-207ENST00000492954 SRFP11831 508 aa19.51■□□□□ 0.71
PTPRU-207ENST00000492954 TYMPP19971 482 aa19.51■□□□□ 0.71
PTPRU-207ENST00000492954 ASIC1P78348 528 aa19.51■□□□□ 0.71
PTPRU-207ENST00000492954 OVOS1Q6IE37 1185 aa19.51■□□□□ 0.71
PTPRU-207ENST00000492954 NPAS3Q8IXF0 933 aa19.51■□□□□ 0.71
PTPRU-207ENST00000492954 TMEM105Q8N8V8 129 aa19.51■□□□□ 0.71
PTPRU-207ENST00000492954 FLCNQ8NFG4 579 aa19.51■□□□□ 0.71
PTPRU-207ENST00000492954 PGLYRP2Q96PD5 576 aa19.51■□□□□ 0.71
PTPRU-207ENST00000492954 CBWD1Q9BRT8 395 aa19.51■□□□□ 0.71
PTPRU-207ENST00000492954 RPP25Q9BUL9 199 aaKnown RBP19.51■□□□□ 0.71
PTPRU-207ENST00000492954 PCDHA7Q9UN72 937 aa19.51■□□□□ 0.71
PTPRU-207ENST00000492954 GOLGA8IPA6NC78 632 aa19.5■□□□□ 0.71
PTPRU-207ENST00000492954 OR6C75A6NL08 312 aa19.5■□□□□ 0.71
PTPRU-207ENST00000492954 GOLGA8JA6NMD2 632 aa19.5■□□□□ 0.71
PTPRU-207ENST00000492954 VNN2O95498 520 aa19.5■□□□□ 0.71
PTPRU-207ENST00000492954 ODC1P11926 461 aa19.5■□□□□ 0.71
PTPRU-207ENST00000492954 PTPN2P17706 415 aa19.5■□□□□ 0.71
PTPRU-207ENST00000492954 GARTP22102 1010 aa19.5■□□□□ 0.71
PTPRU-207ENST00000492954 AMPD3Q01432 767 aa19.5■□□□□ 0.71
PTPRU-207ENST00000492954 TWF1Q12792 350 aa19.5■□□□□ 0.71
PTPRU-207ENST00000492954 TCF15Q12870 199 aa19.5■□□□□ 0.71
PTPRU-207ENST00000492954 CWF19L1Q69YN2 538 aaKnown RBP19.5■□□□□ 0.71
PTPRU-207ENST00000492954 ATL3Q6DD88 541 aa19.5■□□□□ 0.71
PTPRU-207ENST00000492954 ASTLQ6HA08 431 aaPredicted RBP19.5■□□□□ 0.71
PTPRU-207ENST00000492954 BRSK2Q8IWQ3 736 aa19.5■□□□□ 0.71
PTPRU-207ENST00000492954 PRRX2Q99811 253 aa19.5■□□□□ 0.71
PTPRU-207ENST00000492954 CORO1BQ9BR76 489 aa19.5■□□□□ 0.71
PTPRU-207ENST00000492954 OXCT2Q9BYC2 517 aaPredicted RBP19.5■□□□□ 0.71
PTPRU-207ENST00000492954 PCIF1Q9H4Z3 704 aa19.5■□□□□ 0.71
PTPRU-207ENST00000492954 AVENQ9NQS1 362 aaPredicted RBP19.5■□□□□ 0.71
PTPRU-207ENST00000492954 NOTCH4Q99466 2003 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 CACNA1HO95180 2353 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 KRBA1A5PL33 1030 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 NPR3P17342 541 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 CEBPBP17676 345 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 PAX3P23760 479 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 PTPN5P54829 565 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 RESP18Q5W5W9 173 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 ARMCX5Q6P1M9 558 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 CNNM4Q6P4Q7 775 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 GPR152Q8TDT2 470 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 NOC3LQ8WTT2 800 aaKnown RBP19.49■□□□□ 0.71
PTPRU-207ENST00000492954 TCEAL4Q96EI5 215 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 TMEM209Q96SK2 561 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 TMEM206Q9H813 350 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 RBAKQ9NYW8 714 aaPredicted RBP19.49■□□□□ 0.71
PTPRU-207ENST00000492954 CEP72Q9P209 647 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 WNT16Q9UBV4 365 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 CFAP45Q9UL16 551 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 CA14Q9ULX7 337 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 MAFFQ9ULX9 164 aa19.49■□□□□ 0.71
PTPRU-207ENST00000492954 YIPF1Q9Y548 306 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms