RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 CAVIN2O95810 425 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 MLYCDO95822 493 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 ALDH1A1P00352 501 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 F12P00748 615 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 GSNP06396 782 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 NR2F1P10589 423 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 UBL4AP11441 157 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 ZFXP17010 805 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 PEX2P28328 305 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 ADSLP30566 484 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 GPC1P35052 558 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 PSMC2P35998 433 aaKnown RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 LONP1P36776 959 aaKnown RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 PPARGP37231 505 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 DPP6P42658 865 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 ARCN1P48444 511 aaKnown RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 FXR1P51114 621 aaKnown RBP eCLIP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 RARSP54136 660 aaKnown RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 KCNJ10P78508 379 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 LRMPQ12912 555 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 HNRNPDQ14103 355 aaKnown RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 STK38Q15208 465 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 TMEM266Q2M3C6 531 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 ATAT1Q5SQI0 421 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 SNAP47Q5SQN1 464 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 KANK2Q63ZY3 851 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 CREB3L3Q68CJ9 461 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 ADALQ6DHV7 355 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 INTS5Q6P9B9 1019 aaKnown RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 APOA5Q6Q788 366 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 SLC22A25Q6T423 547 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 LYPD8Q6UX82 237 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 ZNF574Q6ZN55 896 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 MICALCLQ6ZW33 695 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 MARK2Q7KZI7 788 aaKnown RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 DHX32Q7L7V1 743 aaKnown RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 FGD2Q7Z6J4 655 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 PRPF39Q86UA1 669 aaKnown RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 SESTD1Q86VW0 696 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 ERO1BQ86YB8 467 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 UNC5CLQ8IV45 518 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 TTC5Q8N0Z6 440 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 VWA5B2Q8N398 1253 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 WHAMMQ8TF30 809 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 HERVK_113Q902F9 699 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 WASF1Q92558 559 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 ANKS1AQ92625 1134 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 CNKSR1Q969H4 720 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 C19orf60Q96EN9 201 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 TMEM41AQ96HV5 264 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 SPXQ9BT56 116 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 GGNBP2Q9H3C7 697 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 STN1Q9H668 368 aaKnown RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 MVB12BQ9H7P6 319 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 SNTG1Q9NSN8 517 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 GDAP2Q9NXN4 497 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 RCOR1Q9UKL0 485 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 VAV3Q9UKW4 847 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 MAGED2Q9UNF1 606 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-220ENST00000492859 PHF24Q9UPV7 400 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 MRFAP1Q9Y605 127 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 GMEB1Q9Y692 573 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 CAPN7Q9Y6W3 813 aa4.5□□□□□ -1.69
BRCA1-220ENST00000492859 PASKQ96RG2 1323 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 LTBP3Q9NS15 1303 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 A0A1W2PQH9 124 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 GOLGA6L4A6NEF3 574 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 FOXO6A8MYZ6 492 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 EIF3CLB5ME19 914 aaKnown RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 H0YAE9 185 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 GOLGA8SH3BPF8 625 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 TRDMT1O14717 391 aaKnown RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 AXIN1O15169 862 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 CA12O43570 354 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 IDH1O75874 414 aaKnown RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ENO2P09104 434 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 JMJD7P0C870 316 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 TMIGD3P0DMS9 266 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 BCRP11274 1271 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 FGFR1P11362 822 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 MYL4P12829 197 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ALOX15P16050 662 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 CHMP24386 653 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ACAT1P24752 427 aaKnown RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 EEF1GP26641 437 aaKnown RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 CDC25CP30307 473 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 AXLP30530 894 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 CCR1P32246 355 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 TTKP33981 857 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 TAGLN2P37802 199 aaKnown RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 WNT5AP41221 380 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 MAPKAPK2P49137 400 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ITGA8P53708 1063 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 SLC8A3P57103 927 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ARF3P61204 181 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 OLR1P78380 273 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 KRT85P78386 507 aa4.49□□□□□ -1.69
BRCA1-220ENST00000492859 ARF1P84077 181 aaKnown RBP4.49□□□□□ -1.69
BRCA1-220ENST00000492859 CBX3Q13185 183 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms