RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 RNF149Q8NC42 400 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 FGD4Q96M96 766 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 TMEM134Q9H6X4 195 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 LRRC19Q9H756 370 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 DNAJC17Q9NVM6 304 aaKnown RBP13.68□□□□□ -0.22
PRAME-213ENST00000492657 TP73O15350 636 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 ECEL1O95672 775 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 LDHAP00338 332 aaKnown RBP13.68□□□□□ -0.22
PRAME-213ENST00000492657 CHRM1P11229 460 aaPredicted RBP13.68□□□□□ -0.22
PRAME-213ENST00000492657 TCF4P15884 667 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 BRD2P25440 801 aaKnown RBP13.68□□□□□ -0.22
PRAME-213ENST00000492657 SLCO1A2P46721 670 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 VPS41P49754 854 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 PPP2R2AP63151 447 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 KRT17Q04695 432 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 LAMTOR4Q0VGL1 99 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 ATP13A4Q4VNC1 1196 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 FAM160B1Q5W0V3 765 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 METTL7BQ6UX53 244 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 PRUNE1Q86TP1 453 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 ZNF677Q86XU0 584 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 CNPY4Q8N129 248 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 ARFGAP2Q8N6H7 521 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 CABS1Q96KC9 395 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 PWWP2AQ96N64 755 aa13.68□□□□□ -0.22
PRAME-213ENST00000492657 ZBTB42B2RXF5 422 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 FAM189A1O60320 539 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 PROSCO94903 275 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 RALAP11233 206 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 RPL7AP62424 266 aaKnown RBP13.67□□□□□ -0.22
PRAME-213ENST00000492657 IFI35P80217 286 aaPredicted RBP13.67□□□□□ -0.22
PRAME-213ENST00000492657 PTP4A2Q12974 167 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 WDR78Q5VTH9 848 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 DENND2CQ68D51 928 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 CCDC50Q8IVM0 306 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 C12orf50Q8NA57 414 aaPredicted RBP13.67□□□□□ -0.22
PRAME-213ENST00000492657 ZNF606Q8WXB4 792 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 ART4Q93070 314 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 AZI2Q9H6S1 392 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.67□□□□□ -0.22
PRAME-213ENST00000492657 PASKQ96RG2 1323 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 B4GALT5O43286 388 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 WEE2P0C1S8 567 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 ABCD1P33897 745 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 SCARA5Q6ZMJ2 495 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 BRSK2Q8IWQ3 736 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 FBXO16Q8IX29 292 aaPredicted RBP13.67□□□□□ -0.22
PRAME-213ENST00000492657 CEP120Q8N960 986 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 FAM81BQ96LP2 452 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 GPR20Q99678 358 aa13.67□□□□□ -0.22
PRAME-213ENST00000492657 ACO2Q99798 780 aaKnown RBP13.67□□□□□ -0.22
PRAME-213ENST00000492657 PAPPA2Q9BXP8 1791 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 SIP14410 1827 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 PI4K2BG5E9Z4 385 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 FAM107AO95990 144 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 CHKAP35790 457 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 LIN9Q5TKA1 542 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 MICALCLQ6ZW33 695 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 THNSL1Q8IYQ7 743 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 EPS8L3Q8TE67 593 aaKnown RBP13.66□□□□□ -0.22
PRAME-213ENST00000492657 SCLT1Q96NL6 688 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 DDX23Q9BUQ8 820 aaKnown RBP13.66□□□□□ -0.22
PRAME-213ENST00000492657 DCLK3Q9C098 648 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 AAASQ9NRG9 546 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 MTRF1LQ9UGC7 380 aaKnown RBP13.66□□□□□ -0.22
PRAME-213ENST00000492657 ASIC3Q9UHC3 531 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 CEP83Q9Y592 693 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 TLR3O15455 904 aaKnown RBP13.66□□□□□ -0.22
PRAME-213ENST00000492657 CSDE1O75534 798 aaKnown RBP13.66□□□□□ -0.22
PRAME-213ENST00000492657 SKAP2O75563 359 aaPredicted RBP13.66□□□□□ -0.22
PRAME-213ENST00000492657 PRKCBP05771 671 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 NUDT17P0C025 328 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 MYBL1P10243 752 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 ADCY2Q08462 1091 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 RHPN2Q8IUC4 686 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 SULF1Q8IWU6 871 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 N4BP2L2Q92802 583 aaPredicted RBP13.66□□□□□ -0.22
PRAME-213ENST00000492657 DCPSQ96C86 337 aaKnown RBP13.66□□□□□ -0.22
PRAME-213ENST00000492657 TLCD1Q96CP7 247 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 MRPL4Q9BYD3 311 aaKnown RBP13.66□□□□□ -0.22
PRAME-213ENST00000492657 CCDC113Q9H0I3 377 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 PDGFCQ9NRA1 345 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 RBPJLQ9UBG7 517 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 CNTN6Q9UQ52 1028 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 LOC285556D6RIA3 1793 aa13.66□□□□□ -0.22
PRAME-213ENST00000492657 TOM1L1O75674 476 aa13.65□□□□□ -0.22
PRAME-213ENST00000492657 ASS1P00966 412 aaKnown RBP13.65□□□□□ -0.22
PRAME-213ENST00000492657 TFAMQ00059 246 aaKnown RBP13.65□□□□□ -0.22
PRAME-213ENST00000492657 IER5Q5VY09 327 aa13.65□□□□□ -0.22
PRAME-213ENST00000492657 EEF1DP3Q658K8 133 aa13.65□□□□□ -0.22
PRAME-213ENST00000492657 PLEKHA7Q6IQ23 1121 aa13.65□□□□□ -0.22
PRAME-213ENST00000492657 PHF13Q86YI8 300 aaPredicted RBP13.65□□□□□ -0.22
PRAME-213ENST00000492657 SLC24A3Q9HC58 644 aa13.65□□□□□ -0.22
PRAME-213ENST00000492657 A0A0G2JLL6 359 aaPredicted RBP13.65□□□□□ -0.22
PRAME-213ENST00000492657 NOP56O00567 594 aaKnown RBP13.65□□□□□ -0.22
PRAME-213ENST00000492657 ABLIM1O14639 778 aa13.65□□□□□ -0.22
PRAME-213ENST00000492657 RPSAP08865 295 aaKnown RBP13.65□□□□□ -0.22
PRAME-213ENST00000492657 SLC1A1P43005 524 aa13.65□□□□□ -0.22
PRAME-213ENST00000492657 EIF3BP55884 814 aaKnown RBP13.65□□□□□ -0.22
PRAME-213ENST00000492657 PLCB4Q15147 1175 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms