RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 SPATA20Q8TB22 786 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 PLEKHO2Q8TD55 490 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 TMEM174Q8WUU8 243 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 ZNF516Q92618 1163 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 ERCC4Q92889 916 aaPredicted RBP7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 SENP8Q96LD8 212 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 POP1Q99575 1024 aaKnown RBP7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 RHOBTB2Q9BYZ6 727 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 PLEKHA4Q9H4M7 779 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 SFXN1Q9H9B4 322 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 EXOC1Q9NV70 894 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 CHMP5Q9NZZ3 219 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 SIX4Q9UIU6 781 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 FBXL5Q9UKA1 691 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 FBXW11Q9UKB1 542 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 NUB1Q9Y5A7 615 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 CDY1Q9Y6F8 540 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 MYH11P35749 1972 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 C2CD4DB7Z1M9 353 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 PI4K2BG5E9Z4 385 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 N4BP1O75113 896 aaKnown RBP7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 ZMYND10O75800 440 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 SEC24AO95486 1093 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 CYP11A1P05108 521 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 TYMPP19971 482 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 MTHFRP42898 656 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 CYP2J2P51589 502 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 TFAMQ00059 246 aaKnown RBP7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 ROR1Q01973 937 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 FAM160A1Q05DH4 1040 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 CYP24A1Q07973 514 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 SNRNP35Q16560 246 aaKnown RBP7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 ATAT1Q5SQI0 421 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 CES5AQ6NT32 575 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 DSTYKQ6XUX3 929 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 C15orf39Q6ZRI6 1047 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 RNF135Q8IUD6 432 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 XXYLT1Q8NBI6 393 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 APPL2Q8NEU8 664 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 ZNF461Q8TAF7 563 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 NOC3LQ8WTT2 800 aaKnown RBP7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 RPGRIP1Q96KN7 1286 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 MFSD14AQ96MC6 490 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 TIGD1Q96MW7 591 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 TMEM209Q96SK2 561 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 RTP3Q9BQQ7 232 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 PRKD2Q9BZL6 878 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 MTMR12Q9C0I1 747 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 KCNH6Q9H252 994 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 KIAA1586Q9HCI6 787 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 INTS13Q9NVM9 706 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 ZDHHC7Q9NXF8 308 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 CGNQ9P2M7 1197 aaKnown RBP7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 AGAP1Q9UPQ3 857 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 MAPK8IP1Q9UQF2 711 aa7.77□□□□□ -1.17
PDLIM1-204ENST00000492511 GOLGA6L4A6NEF3 574 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 KPNA7A9QM74 516 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 H7C4K7 107 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 PDXKO00764 312 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 CYB561D2O14569 222 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 CCL16O15467 120 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 CST3P01034 146 aaPredicted RBP7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 ITGB3P05106 788 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 C8AP07357 584 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 OR4Q2P0C623 313 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 ATF2P15336 505 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 SP100P23497 879 aaPredicted RBP7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 PAX3P23760 479 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 POLR2BP30876 1174 aaKnown RBP7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 ANP32AP39687 249 aaKnown RBP7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 CASP4P49662 377 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 ARPP19P56211 112 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 YWHAHQ04917 246 aaPredicted RBP7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 PSMD6Q15008 389 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 UVSSAQ2YD98 709 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 CTXN3Q4LDR2 81 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 C1orf220Q5T0J3 134 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 WSCD1Q658N2 575 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 POTEHQ6S545 545 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 CYP26C1Q6V0L0 522 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 RNF19BQ6ZMZ0 732 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 HS2ST1Q7LGA3 356 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 LIMS2Q7Z4I7 341 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 ALYREFQ86V81 257 aaKnown RBP7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 SLC9A9Q8IVB4 645 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 ELOA2Q8IYF1 753 aaPredicted RBP7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 SMYD4Q8IYR2 804 aaPredicted RBP7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 GUF1Q8N442 669 aaKnown RBP7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 CSGALNACT2Q8N6G5 542 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 CACTINQ8WUQ7 758 aaKnown RBP7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 RIPOR3Q96MK2 946 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 NECTIN4Q96NY8 510 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 CRISPLD1Q9H336 500 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 WDR6Q9NNW5 1121 aaKnown RBP7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 C11orf16Q9NQ32 467 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 DPP7Q9UHL4 492 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 TRAF3IP3Q9Y228 551 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 PCDHA5Q9Y5H7 936 aa7.76□□□□□ -1.17
PDLIM1-204ENST00000492511 VWA8A3KMH1 1905 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms