RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 FRYLO94915 3013 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 KMT2BQ9UMN6 2715 aaPredicted RBP11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 PVALEFA0A1B0GWK0 134 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 TRAK2O60296 914 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 TBC1D4O60343 1298 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 KINO60870 393 aaKnown RBP11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 LRRN2O75325 713 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 DCNP07585 359 aaKnown RBP11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 CXCL8P10145 99 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 KCNE1P15382 129 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 AFMP43652 599 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 GPC5P78333 572 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 SPAG1Q07617 926 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 ANGPT1Q15389 498 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 SLC10A6Q3KNW5 377 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 ARSHQ5FYA8 562 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 ZBTB41Q5SVQ8 909 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 NPAS3Q8IXF0 933 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 SPIRE2Q8WWL2 714 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 ACAP3Q96P50 834 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 GTPBP4Q9BZE4 634 aaKnown RBP11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 FOXQ1Q9C009 403 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 SLC2A4RGQ9NR83 387 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 TOPORSQ9NS56 1045 aaPredicted RBP11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 DLGAP2Q9P1A6 1054 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 PCDHB13Q9Y5F0 798 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 TCHHQ07283 1943 aa11.99□□□□□ -0.49
TMEM39A-211ENST00000491685 MYMKA6NI61 221 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 XYLBO75191 536 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 SMC2O95347 1197 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 SEC24AO95486 1093 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 POU2F2P09086 479 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 GLULP15104 373 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 CEBPBP17676 345 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 TNFSF9P41273 254 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 ARPP19P56211 112 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 PSMD2Q13200 908 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 ALCAMQ13740 583 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 NOLC1Q14978 699 aaKnown RBP eCLIP11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 E2F4Q16254 413 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 PABPC1LQ4VXU2 614 aaKnown RBP11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 SLC8B1Q6J4K2 584 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 KRBA2Q6ZNG9 492 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 ANKS3Q6ZW76 656 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 ELOA2Q8IYF1 753 aaPredicted RBP11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 NXPE3Q969Y0 559 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 PAGE5Q96GU1 130 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 RTP3Q9BQQ7 232 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 REEP2Q9BRK0 252 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 TCHPQ9BT92 498 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 EXOC7Q9UPT5 735 aa11.98□□□□□ -0.49
TMEM39A-211ENST00000491685 CACNA1BQ00975 2339 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 A0A087X0B3 334 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 STK25O00506 426 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 TRAPPC3O43617 180 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 TOM1L1O75674 476 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 ABLIM3O94929 683 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 KIF20AO95235 890 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 RHOP08100 348 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 GUCY2FP51841 1108 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 NCKAP1LP55160 1127 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 ASIC1P78348 528 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 MCL1Q07820 350 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 MRPL58Q14197 206 aaKnown RBP11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 PRSS36Q5K4E3 855 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 CNNM4Q6P4Q7 775 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 FMR1NBQ8N0W7 255 aaPredicted RBP11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 TCEAL4Q96EI5 215 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 PLA2G2FQ9BZM2 168 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 TRIM9Q9C026 710 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 MRPL44Q9H9J2 332 aaKnown RBP11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 SLC38A7Q9NVC3 462 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 FBXL5Q9UKA1 691 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 ZFP37Q9Y6Q3 630 aaPredicted RBP11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 SCN1AP35498 2009 aa11.97□□□□□ -0.49
TMEM39A-211ENST00000491685 NUP210Q8TEM1 1887 aaPredicted RBP11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 NCANO14594 1321 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 MED19A0JLT2 244 aaPredicted RBP11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 ARHGEF37A1IGU5 675 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 PPEF2O14830 753 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 SYN3O14994 580 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 FAM189A1O60320 539 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 VNN2O95498 520 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 RFX1P22670 979 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 FCARP24071 287 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 MCM4P33991 863 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 CCR2P41597 374 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 SNW1Q13573 536 aaKnown RBP11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 SKOR2Q2VWA4 1001 aaPredicted RBP11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 UVSSAQ2YD98 709 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 PHLDB3Q6NSJ2 640 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 ZPBP2Q6X784 338 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 UNC13DQ70J99 1090 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 RTL10Q7L3V2 364 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 HAUS6Q7Z4H7 955 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 ZNF461Q8TAF7 563 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 MCRS1Q96EZ8 462 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 SUSD3Q96L08 255 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms