RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 MYL5Q02045 173 aa14.79□□□□□ -0.04
CDK9-204ENST00000491521 SOX4Q06945 474 aaPredicted RBP14.79□□□□□ -0.04
CDK9-204ENST00000491521 NOLC1Q14978 699 aaKnown RBP eCLIP14.79□□□□□ -0.04
CDK9-204ENST00000491521 OTOP3Q7RTS5 596 aa14.79□□□□□ -0.04
CDK9-204ENST00000491521 GAS2L3Q86XJ1 694 aa14.79□□□□□ -0.04
CDK9-204ENST00000491521 GOLGA5Q8TBA6 731 aa14.79□□□□□ -0.04
CDK9-204ENST00000491521 ENOX1Q8TC92 643 aaKnown RBP14.79□□□□□ -0.04
CDK9-204ENST00000491521 FAM200AQ8TCP9 573 aa14.79□□□□□ -0.04
CDK9-204ENST00000491521 C18orf25Q96B23 403 aaPredicted RBP14.79□□□□□ -0.04
CDK9-204ENST00000491521 SNX27Q96L92 541 aa14.79□□□□□ -0.04
CDK9-204ENST00000491521 FNIP2Q9P278 1114 aa14.79□□□□□ -0.04
CDK9-204ENST00000491521 SORCS3Q9UPU3 1222 aa14.79□□□□□ -0.04
CDK9-204ENST00000491521 ANKRD63C9JTQ0 380 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 TULP1O00294 542 aaPredicted RBP14.78□□□□□ -0.04
CDK9-204ENST00000491521 ADAM12O43184 909 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 TGFB1I1O43294 461 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 FGFR1OPO95684 399 aaKnown RBP14.78□□□□□ -0.04
CDK9-204ENST00000491521 PDGFBP01127 241 aaPredicted RBP14.78□□□□□ -0.04
CDK9-204ENST00000491521 TKTP29401 623 aaKnown RBP14.78□□□□□ -0.04
CDK9-204ENST00000491521 BRCC3P46736 316 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 PMS1P54277 932 aaKnown RBP14.78□□□□□ -0.04
CDK9-204ENST00000491521 LRRC63Q05C16 580 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 ELAVL2Q12926 359 aaKnown RBP14.78□□□□□ -0.04
CDK9-204ENST00000491521 SPATA1Q5VX52 437 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 DCLRE1AQ6PJP8 1040 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 C15orf39Q6ZRI6 1047 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 LUZP1Q86V48 1076 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 CREBRFQ8IUR6 639 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 ZDHHC14Q8IZN3 488 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 PLCD3Q8N3E9 789 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 CSGALNACT2Q8N6G5 542 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 CMASQ8NFW8 434 aaPredicted RBP14.78□□□□□ -0.04
CDK9-204ENST00000491521 LNX1Q8TBB1 728 aaPredicted RBP14.78□□□□□ -0.04
CDK9-204ENST00000491521 NOC3LQ8WTT2 800 aaKnown RBP14.78□□□□□ -0.04
CDK9-204ENST00000491521 UROC1Q96N76 676 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 ZMAT2Q96NC0 199 aaKnown RBP14.78□□□□□ -0.04
CDK9-204ENST00000491521 CLSTN3Q9BQT9 956 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 SRRTQ9BXP5 876 aaKnown RBP14.78□□□□□ -0.04
CDK9-204ENST00000491521 RBSNQ9H1K0 784 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 PLEKHA4Q9H4M7 779 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 PCIF1Q9H4Z3 704 aa14.78□□□□□ -0.04
CDK9-204ENST00000491521 DOCK6Q96HP0 2047 aa14.77□□□□□ -0.04
CDK9-204ENST00000491521 CLUHO75153 1309 aa14.77□□□□□ -0.04
CDK9-204ENST00000491521 PODXLO00592 558 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 ABLIM1O14639 778 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 IKBKBO14920 756 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 CLDN3O15551 220 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 TOM1L1O75674 476 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 PROZP22891 400 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 RPL13P26373 211 aaKnown RBP14.77□□□□□ -0.05
CDK9-204ENST00000491521 CYP2J2P51589 502 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 SNRPFP62306 86 aaKnown RBP14.77□□□□□ -0.05
CDK9-204ENST00000491521 SPAG1Q07617 926 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 ADAM9Q13443 819 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 IQCB1Q15051 598 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 UPP1Q16831 310 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 LIN9Q5TKA1 542 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 TTI2Q6NXR4 508 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 ARMCX5Q6P1M9 558 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 ZPBP2Q6X784 338 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.77□□□□□ -0.05
CDK9-204ENST00000491521 GET4Q7L5D6 327 aaPredicted RBP14.77□□□□□ -0.05
CDK9-204ENST00000491521 DHX40Q8IX18 779 aaKnown RBP14.77□□□□□ -0.05
CDK9-204ENST00000491521 TMEM130Q8N3G9 435 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 C3orf58Q8NDZ4 430 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 ST13P5Q8NFI4 369 aaPredicted RBP14.77□□□□□ -0.05
CDK9-204ENST00000491521 PIK3R5Q8WYR1 880 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 POMGNT1Q8WZA1 660 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 ZNF707Q96C28 371 aaPredicted RBP14.77□□□□□ -0.05
CDK9-204ENST00000491521 ASIC4Q96FT7 647 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 MED15Q96RN5 788 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 DUSP9Q99956 384 aaKnown RBP14.77□□□□□ -0.05
CDK9-204ENST00000491521 AGPAT3Q9NRZ7 376 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 CGNQ9P2M7 1197 aaKnown RBP14.77□□□□□ -0.05
CDK9-204ENST00000491521 POLIQ9UNA4 740 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 TRAF3IP3Q9Y228 551 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 USTQ9Y2C2 406 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 NFE2L3Q9Y4A8 694 aa14.77□□□□□ -0.05
CDK9-204ENST00000491521 TISP43B9A030 160 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 CETN3O15182 167 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 CCL16O15467 120 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 MEFVO15553 781 aaPredicted RBP14.76□□□□□ -0.05
CDK9-204ENST00000491521 N4BP1O75113 896 aaKnown RBP14.76□□□□□ -0.05
CDK9-204ENST00000491521 NR3C1P04150 777 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 CXCL8P10145 99 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 CDK11BP21127 795 aaKnown RBP14.76□□□□□ -0.05
CDK9-204ENST00000491521 FGFR3P22607 806 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 NR2F2P24468 414 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 OR1D2P34982 312 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 ARPP19P56211 112 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 FKBP3Q00688 224 aaKnown RBP14.76□□□□□ -0.05
CDK9-204ENST00000491521 EDRF1Q3B7T1 1238 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 HSP90AA4PQ58FG1 418 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 IER5LQ5T953 404 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 SLFN12LQ6IEE8 588 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 LILRA6Q6PI73 481 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 CD300LGQ6UXG3 332 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 ALKAL1Q6UXT8 129 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 UBALD2Q8IYN6 164 aa14.76□□□□□ -0.05
CDK9-204ENST00000491521 FBXL6Q8N531 539 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms