RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 MRPS9P82933 396 aaKnown RBP11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 CLNKQ7Z7G1 428 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 ZNF554Q86TJ5 538 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 STKLD1Q8NE28 680 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 TCP10LQ8TDR4 215 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 SH3RF3Q8TEJ3 882 aaPredicted RBP11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 DEPDC1BQ8WUY9 529 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 FAF2Q96CS3 445 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 TEKT3Q9BXF9 490 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 CAAP1Q9H8G2 361 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 PREBQ9HCU5 417 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 TRPC5Q9UL62 973 aaPredicted RBP11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 USP20Q9Y2K6 914 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 ZNF804BA4D1E1 1349 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 GMNNO75496 209 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 CCNB1P14635 433 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 CHN2P52757 468 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 ZNF200P98182 395 aaPredicted RBP11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 MTM1Q13496 603 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 PPP2R5DQ14738 602 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 ALG3Q92685 438 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 FAM20AQ96MK3 541 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 SPATA16Q9BXB7 569 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 SHCBP1LQ9BZQ2 653 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 MRPL46Q9H2W6 279 aaKnown RBP11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 LRRC4BQ9NT99 713 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 APPL1Q9UKG1 709 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 CHKBQ9Y259 395 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 SH3GLB1Q9Y371 365 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 UMODL1Q5DID0 1318 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 ESYT2A0FGR8 921 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 SORBS3O60504 671 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 GPC4O75487 556 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 NOL4O94818 638 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 TNFAIP8O95379 198 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 HSPA13P48723 471 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 FUT2Q10981 343 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 ALCAMQ13740 583 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 EPHA7Q15375 998 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 CHI3L2Q15782 390 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 GEN1Q17RS7 908 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 PASD1Q8IV76 773 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 C4orf32Q8N8J7 132 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 SLC5A5Q92911 643 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 POP1Q99575 1024 aaKnown RBP11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 GRIP2Q9C0E4 1043 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 KLHL11Q9NVR0 708 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 SOX13Q9UN79 622 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 NR2E1Q9Y466 385 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 TACC3Q9Y6A5 838 aa11.87□□□□□ -0.51
CRNKL1-204ENST00000490910 BGNP21810 368 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 ITGA9Q13797 1035 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 OASLQ15646 514 aaKnown RBP11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 KCTD21Q4G0X4 260 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 SLFN13Q68D06 897 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 NET1Q7Z628 596 aaPredicted RBP11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 NAT14Q8WUY8 206 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 NSUN4Q96CB9 384 aaKnown RBP11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 ZBTB5O15062 677 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 HDAC4P56524 1084 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 LRRC8BQ6P9F7 803 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 RIPOR1Q6ZS17 1223 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 OTOAQ7RTW8 1153 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 SLC20A1Q8WUM9 679 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 SLC35C1Q96A29 364 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 WDR11Q9BZH6 1224 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 RPTORQ8N122 1335 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 HNRNPDLO14979 420 aaKnown RBP11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 VIL1P09327 827 aaKnown RBP11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 CCDC166P0CW27 439 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 CHKAP35790 457 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 AQP5P55064 265 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 NUP107P57740 925 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 PRAMEP78395 509 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 CBX3Q13185 183 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 AP3B2Q13367 1082 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 PDK3Q15120 406 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 RBM44Q6ZP01 1051 aaKnown RBP11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 TSHZ1Q6ZSZ6 1077 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 NEDD1Q8NHV4 660 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 PYDC1Q8WXC3 89 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 CCDC138Q96M89 665 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 PAFAH2Q99487 392 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 GID8Q9NWU2 228 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 SUGT1Q9Y2Z0 365 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 PIK3CDO00329 1044 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 GZMAP12544 262 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 ALADP13716 330 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 RTP1P59025 263 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 LPCAT2Q7L5N7 544 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 SCYL1Q96KG9 808 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 GCNAQ96QF7 691 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 PCDHA3Q9Y5H8 950 aa11.86□□□□□ -0.51
CRNKL1-204ENST00000490910 MROH7Q68CQ1 1323 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 PXDNQ92626 1479 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 UFL1O94874 794 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 FAM58BPP0C7Q3 252 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 ABL2P42684 1182 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 MARCKSL1P49006 195 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms