RNA–Protein interactions for RNA: ENST00000490389.1

FARP1-207, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-207ENST00000490389 HPDLQ96IR7 371 aa13.37□□□□□ -0.27
FARP1-207ENST00000490389 SUSD3Q96L08 255 aa13.37□□□□□ -0.27
FARP1-207ENST00000490389 SENP8Q96LD8 212 aa13.37□□□□□ -0.27
FARP1-207ENST00000490389 IGFLR1Q9H665 355 aa13.37□□□□□ -0.27
FARP1-207ENST00000490389 MAGEC2Q9UBF1 373 aaPredicted RBP13.37□□□□□ -0.27
FARP1-207ENST00000490389 STK39Q9UEW8 545 aa13.37□□□□□ -0.27
FARP1-207ENST00000490389 NFE2L3Q9Y4A8 694 aa13.37□□□□□ -0.27
FARP1-207ENST00000490389 SZT2Q5T011 3432 aa13.37□□□□□ -0.27
FARP1-207ENST00000490389 KPNA7A9QM74 516 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 CYB561D2O14569 222 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 FSCN2O14926 492 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 PER2O15055 1255 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 CST3P01034 146 aaPredicted RBP13.36□□□□□ -0.27
FARP1-207ENST00000490389 HLA-DRAP01903 254 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 C4BPAP04003 597 aaKnown RBP13.36□□□□□ -0.27
FARP1-207ENST00000490389 ODC1P11926 461 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 RPL17P18621 184 aaKnown RBP13.36□□□□□ -0.27
FARP1-207ENST00000490389 MTIF2P46199 727 aaKnown RBP13.36□□□□□ -0.27
FARP1-207ENST00000490389 MXI1P50539 228 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 DSG1Q02413 1049 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 SKIV2LQ15477 1246 aaKnown RBP13.36□□□□□ -0.27
FARP1-207ENST00000490389 ZNF699Q32M78 642 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 ZACNQ401N2 412 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 TCEAL5Q5H9L2 206 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 PDE12Q6L8Q7 609 aaKnown RBP13.36□□□□□ -0.27
FARP1-207ENST00000490389 ADGRD2Q7Z7M1 963 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 FAM114A1Q8IWE2 563 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 RNF168Q8IYW5 571 aaPredicted RBP13.36□□□□□ -0.27
FARP1-207ENST00000490389 AOPEPQ8N6M6 819 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 LRRC52Q8N7C0 313 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 MRPL43Q8N983 215 aaKnown RBP13.36□□□□□ -0.27
FARP1-207ENST00000490389 APPL2Q8NEU8 664 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 CXorf38Q8TB03 319 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 ENOX1Q8TC92 643 aaKnown RBP13.36□□□□□ -0.27
FARP1-207ENST00000490389 TAS1R2Q8TE23 839 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 PPP2R3CQ969Q6 453 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 THAP9Q9H5L6 903 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 NSUN3Q9H649 340 aaKnown RBP13.36□□□□□ -0.27
FARP1-207ENST00000490389 TLE6Q9H808 572 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 TMEM8AQ9HCN3 771 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 SAMSN1Q9NSI8 373 aaKnown RBP13.36□□□□□ -0.27
FARP1-207ENST00000490389 LMCD1Q9NZU5 365 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 NXF1Q9UBU9 619 aaKnown RBP13.36□□□□□ -0.27
FARP1-207ENST00000490389 PCDHB8Q9UN66 801 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 SSUH2Q9Y2M2 353 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 SNX9Q9Y5X1 595 aa13.36□□□□□ -0.27
FARP1-207ENST00000490389 KIAA1671Q9BY89 1806 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 C2orf71A6NGG8 1288 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 SYN3O14994 580 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 HUS1O60921 280 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 VNN1O95497 513 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 EFEMP2O95967 443 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 FGFR3P22607 806 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 GTF2H1P32780 548 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 NRIP1P48552 1158 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 AARSP49588 968 aaKnown RBP eCLIP13.35□□□□□ -0.27
FARP1-207ENST00000490389 MYL5Q02045 173 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 ENPEPQ07075 957 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 PSMD5Q16401 504 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 VARS2Q5ST30 1063 aaKnown RBP13.35□□□□□ -0.27
FARP1-207ENST00000490389 KIAA0319Q5VV43 1072 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 KRT39Q6A163 491 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 EP400NLQ6ZTU2 488 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 IRF2BP1Q8IU81 584 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 TRIM59Q8IWR1 403 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 SLC35C1Q96A29 364 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 MMS19Q96T76 1030 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 PI4K2AQ9BTU6 479 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 FUCA2Q9BTY2 467 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 EMILIN2Q9BXX0 1053 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 CHST7Q9NS84 486 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 SSX2IPQ9Y2D8 614 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.35□□□□□ -0.27
FARP1-207ENST00000490389 CITO14578 2027 aa13.35□□□□□ -0.27
FARP1-207ENST00000490389 RALGAPA2Q2PPJ7 1873 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 ARHGEF37A1IGU5 675 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 KCNJ18B7U540 433 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 M0QZQ0 153 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 PES1O00541 588 aaKnown RBP13.34□□□□□ -0.27
FARP1-207ENST00000490389 AFPP02771 609 aaKnown RBP13.34□□□□□ -0.27
FARP1-207ENST00000490389 CNPP09543 421 aaKnown RBP13.34□□□□□ -0.27
FARP1-207ENST00000490389 PRKCSHP14314 528 aaPredicted RBP13.34□□□□□ -0.27
FARP1-207ENST00000490389 PAX3P23760 479 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 KLRC2P26717 231 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 GTF2F1P35269 517 aaKnown RBP eCLIP13.34□□□□□ -0.27
FARP1-207ENST00000490389 ZNF165P49910 485 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 ARPP19P56211 112 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 TNNC1P63316 161 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 MYL7Q01449 175 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 YWHAHQ04917 246 aaPredicted RBP13.34□□□□□ -0.27
FARP1-207ENST00000490389 KCNJ12Q14500 433 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 WDR72Q3MJ13 1102 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 CBWD6Q4V339 395 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 CBWD3Q5JTY5 395 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 CBWD5Q5RIA9 395 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 WSCD1Q658N2 575 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 LLGL2Q6P1M3 1020 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 SCARA5Q6ZMJ2 495 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 C15orf39Q6ZRI6 1047 aa13.34□□□□□ -0.27
FARP1-207ENST00000490389 METTL23Q86XA0 190 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms