RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 MAGEA10P43363 369 aaPredicted RBP4.9□□□□□ -1.63
CD46-216ENST00000490278 KCNJ5P48544 419 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 RNASE9P60153 205 aaKnown RBP4.9□□□□□ -1.63
CD46-216ENST00000490278 PICALMQ13492 652 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 R3HDM1Q15032 1099 aaKnown RBP4.9□□□□□ -1.63
CD46-216ENST00000490278 NOMO2Q5JPE7 1267 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 FBXO41Q8TF61 875 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 DVL3Q92997 716 aaPredicted RBP4.9□□□□□ -1.63
CD46-216ENST00000490278 SCAMP4Q969E2 229 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 KLHL32Q96NJ5 620 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 CDK5RAP1Q96SZ6 601 aaKnown RBP4.9□□□□□ -1.63
CD46-216ENST00000490278 NEU1Q99519 415 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 GPR35Q9HC97 309 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 SLC52A1Q9NWF4 448 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 AURKAIP1Q9NWT8 199 aaPredicted RBP4.9□□□□□ -1.63
CD46-216ENST00000490278 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.9□□□□□ -1.63
CD46-216ENST00000490278 USP25Q9UHP3 1055 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 SORCS3Q9UPU3 1222 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 ATP11BQ9Y2G3 1177 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 MED16Q9Y2X0 877 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 TESMINQ9Y4I5 508 aa4.9□□□□□ -1.63
CD46-216ENST00000490278 GRXCR1A8MXD5 290 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 ISM1B1AKI9 464 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 MYO1FO00160 1098 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 PMM2O15305 246 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 PQBP1O60828 265 aaKnown RBP4.89□□□□□ -1.63
CD46-216ENST00000490278 MAP4K4O95819 1239 aaPredicted RBP4.89□□□□□ -1.63
CD46-216ENST00000490278 CHEK2O96017 543 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 HABP2Q14520 560 aaPredicted RBP4.89□□□□□ -1.63
CD46-216ENST00000490278 TSHZ3Q63HK5 1081 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 C11orf96Q7Z7L8 435 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 TMPRSS6Q8IU80 811 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 PALM2Q8IXS6 379 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 KRT78Q8N1N4 520 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 SLC17A8Q8NDX2 589 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 TMIEQ8NEW7 156 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 OR56A1Q8NGH5 318 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 KBTBD7Q8WVZ9 684 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 DDX17Q92841 729 aaKnown RBP4.89□□□□□ -1.63
CD46-216ENST00000490278 APIPQ96GX9 242 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 SUCLG2Q96I99 432 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 P2RX7Q99572 595 aaKnown RBP4.89□□□□□ -1.63
CD46-216ENST00000490278 APOL5Q9BWW9 433 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 IMPG2Q9BZV3 1241 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 SIK2Q9H0K1 926 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 NUP62CLQ9H1M0 184 aa4.89□□□□□ -1.63
CD46-216ENST00000490278 USP15Q9Y4E8 981 aaPredicted RBP4.89□□□□□ -1.63
CD46-216ENST00000490278 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.89□□□□□ -1.63
CD46-216ENST00000490278 TBX3O15119 743 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 ZNF185O15231 689 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 SCAF4O95104 1147 aaKnown RBP4.88□□□□□ -1.63
CD46-216ENST00000490278 SPATA31D3P0C874 917 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 FCER1AP12319 257 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 BRAFP15056 766 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 RPL17P18621 184 aaKnown RBP4.88□□□□□ -1.63
CD46-216ENST00000490278 EN2P19622 333 aaPredicted RBP4.88□□□□□ -1.63
CD46-216ENST00000490278 ZNF135P52742 658 aaPredicted RBP4.88□□□□□ -1.63
CD46-216ENST00000490278 ARFIP2P53365 341 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 PTTG1IPP53801 180 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 SLFN5Q08AF3 891 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 EFEMP1Q12805 493 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 HDAC1Q13547 482 aaPredicted RBP4.88□□□□□ -1.63
CD46-216ENST00000490278 TOB2Q14106 344 aaPredicted RBP4.88□□□□□ -1.63
CD46-216ENST00000490278 UBE4AQ14139 1066 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 RABL3Q5HYI8 236 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 CRB2Q5IJ48 1285 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 IL31Q6EBC2 164 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 SPATA31D4Q6ZUB0 917 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 GDF7Q7Z4P5 450 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 USP37Q86T82 979 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 PCSK9Q8NBP7 692 aaKnown RBP4.88□□□□□ -1.63
CD46-216ENST00000490278 PDPRQ8NCN5 879 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 SVIPQ8NHG7 77 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 CPT1CQ8TCG5 803 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 MARS2Q96GW9 593 aaKnown RBP4.88□□□□□ -1.63
CD46-216ENST00000490278 PNKPQ96T60 521 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 C1QTNF3Q9BXJ4 246 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 TLR10Q9BXR5 811 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 TRIM54Q9BYV2 358 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 TINAGL1Q9GZM7 467 aaPredicted RBP4.88□□□□□ -1.63
CD46-216ENST00000490278 BTBD1Q9H0C5 482 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 ZNF700Q9H0M5 742 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 RNPEPQ9H4A4 650 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 KIAA1586Q9HCI6 787 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 KLHL11Q9NVR0 708 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 TRPM5Q9NZQ8 1165 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 CHST2Q9Y4C5 530 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 USP19O94966 1318 aa4.88□□□□□ -1.63
CD46-216ENST00000490278 A0A1B0GTW7 788 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 E9PLN8 166 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 RPS6KA4O75676 772 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 THP07101 528 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 SLC5A1P13866 664 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 ZNF20P17024 532 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 NEK3P51956 506 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 SUMO3P55854 103 aaPredicted RBP4.87□□□□□ -1.63
CD46-216ENST00000490278 ADAM17P78536 824 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 MXRA7P84157 204 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 FMO1Q01740 532 aa4.87□□□□□ -1.63
CD46-216ENST00000490278 CNGA2Q16280 664 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms