RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 MAML3Q96JK9 1138 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 NYAP2Q9P242 653 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 DNAJC5BQ9UF47 199 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 SLIT1O75093 1534 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 LAMC2Q13753 1193 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 FAM83EQ2M2I3 478 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 ARHGEF1Q92888 912 aaKnown RBP9.27□□□□□ -0.93
LSAMP-205ENST00000490035 SH3KBP1Q96B97 665 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 NR1H4Q96RI1 486 aaPredicted RBP9.27□□□□□ -0.93
LSAMP-205ENST00000490035 APRTP07741 180 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 ACADSP16219 412 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 ADSSL1Q8N142 457 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 DAGLBQ8NCG7 672 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 EXT2Q93063 718 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 PRRG3Q9BZD7 231 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 HSPBP1Q9NZL4 362 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 AP4S1Q9Y587 144 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 ADGRA3Q8IWK6 1321 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 LARGE1O95461 756 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 IGKV5-2P06315 115 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 C16orf86Q6ZW13 317 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 TRPM8Q7Z2W7 1104 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 SZRD1Q7Z422 152 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 COL23A1Q86Y22 540 aaPredicted RBP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 RBM15Q96T37 977 aaKnown RBP eCLIP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 WHRNQ9P202 907 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 ZC3H7BQ9UGR2 993 aaKnown RBP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 ENOPH1Q9UHY7 261 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 DCTN4Q9UJW0 460 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 PTPRUQ92729 1446 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 GPSM2P81274 684 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 PPARDQ03181 441 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 NCOA4Q13772 614 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 ZNF746Q6NUN9 644 aaPredicted RBP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 LVRNQ6Q4G3 990 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 CHST13Q8NET6 341 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 THAP11Q96EK4 314 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 CCDC90BQ9GZT6 254 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 UCHL3P15374 230 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 RPS12P25398 132 aaKnown RBP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 ITGA9Q13797 1035 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 TIGD7Q6NT04 549 aaPredicted RBP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 PPIL6Q8IXY8 311 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 MMGT1Q8N4V1 131 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 PDCD6IPQ8WUM4 868 aaKnown RBP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 POP5Q969H6 163 aaKnown RBP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 HEMGNQ9BXL5 484 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 OSBPL8Q9BZF1 889 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 ARHGEF38Q9NXL2 777 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 SFI1A8K8P3 1242 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 DAB1O75553 588 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 ARIH2O95376 493 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 KCNA2P16389 499 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 RPA1P27694 616 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 SHC4Q6S5L8 630 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 NLRP9Q7RTR0 991 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 MTMR4Q9NYA4 1195 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 ATP11BQ9Y2G3 1177 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 TRIM49BA6NDI0 452 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 ZNF543Q08ER8 600 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 TMEM259Q4ZIN3 620 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 BOLA3Q53S33 107 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 OSCP1Q8WVF1 389 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 ERP44Q9BS26 406 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 ABT1Q9ULW3 272 aaKnown RBP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 PPLO60437 1756 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 UBA6A0AVT1 1052 aaPredicted RBP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 NCAM2O15394 837 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 MRPS25P82663 173 aaKnown RBP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 MYBPC2Q14324 1141 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 SNRNP35Q16560 246 aaKnown RBP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 TUBE1Q9UJT0 475 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 PRKCBP05771 671 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 CYP19A1P11511 503 aaPredicted RBP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 TRPC1P48995 793 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 NME3Q13232 169 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 SF3B3Q15393 1217 aaKnown RBP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 PKN3Q6P5Z2 889 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 USP17L6PQ6QN14 398 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 CCT8L2Q96SF2 557 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 DDX47Q9H0S4 455 aaKnown RBP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 SUFUQ9UMX1 484 aa9.26□□□□□ -0.93
LSAMP-205ENST00000490035 AAR2Q9Y312 384 aaKnown RBP9.26□□□□□ -0.93
LSAMP-205ENST00000490035 HBP1O60381 514 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 KITP10721 976 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 ETFBP38117 255 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 PRKCQQ04759 706 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 FIGNQ5HY92 759 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 AGAP9Q5VTM2 703 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 ANKRD40Q6AI12 368 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 CCNI2Q6ZMN8 369 aaPredicted RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 PLD3Q8IV08 490 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 THOC1Q96FV9 657 aaKnown RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 PIDD1Q9HB75 910 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 ERAP1Q9NZ08 941 aa9.25□□□□□ -0.93
LSAMP-205ENST00000490035 H2AFY2Q9P0M6 372 aaPredicted RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 ZC3H4Q9UPT8 1303 aaKnown RBP9.25□□□□□ -0.93
LSAMP-205ENST00000490035 FRMD3A2A2Y4 597 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms