RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 SCAF4O95104 1147 aaKnown RBP4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 MYL3P08590 195 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 BRAFP15056 766 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 NEK3P51956 506 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 RNASE9P60153 205 aaKnown RBP4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 UBE4AQ14139 1066 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 HABP2Q14520 560 aaPredicted RBP4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 BRD3Q15059 726 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 NOMO2Q5JPE7 1267 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 EMC10Q5UCC4 262 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 HTR3DQ70Z44 454 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 USP37Q86T82 979 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 PALM2Q8IXS6 379 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 TTC9BQ8N6N2 239 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 TMIEQ8NEW7 156 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 OR6B3Q8NGW1 331 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 NUP133Q8WUM0 1156 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 ANKS1AQ92625 1134 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 SCAMP4Q969E2 229 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 MARS2Q96GW9 593 aaKnown RBP4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 APIPQ96GX9 242 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 SUCLG2Q96I99 432 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 MRGPRX1Q96LB2 322 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 SIK2Q9H0K1 926 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 ZNF287Q9HBT7 754 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 TRPM5Q9NZQ8 1165 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 SNX13Q9Y5W8 968 aa4.36□□□□□ -1.71
AC055855.1-201ENST00000489563 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 RHPN2P1A8MT19 583 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 ISM1B1AKI9 464 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 DIRC3C9JPN6 131 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 ZNF185O15231 689 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 FRS3O43559 492 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 TBC1D4O60343 1298 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 IFIT2P09913 472 aaKnown RBP4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 SPATA31D3P0C874 917 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 ZKSCAN1P17029 563 aaPredicted RBP4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 ZNF135P52742 658 aaPredicted RBP4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 SUMO3P55854 103 aaPredicted RBP4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 MXRA7P84157 204 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 CNGA2Q16280 664 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 FAM102AQ5T9C2 384 aaPredicted RBP4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 AGAP9Q5VTM2 703 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 FOXR2Q6PJQ5 311 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 ZNF783Q6ZMS7 281 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 SPATA31D4Q6ZUB0 917 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 ZFPM1Q8IX07 1006 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 RHOT2Q8IXI1 618 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 OR56A1Q8NGH5 318 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 CPT1CQ8TCG5 803 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 PARD3BQ8TEW8 1205 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 KBTBD7Q8WVZ9 684 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 DDX17Q92841 729 aaKnown RBP4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 TNIP3Q96KP6 325 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 KLHL32Q96NJ5 620 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 CDK5RAP1Q96SZ6 601 aaKnown RBP4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 PNKPQ96T60 521 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 RNPEPQ9H4A4 650 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 GPR35Q9HC97 309 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 CHST12Q9NRB3 414 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 SACM1LQ9NTJ5 587 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 AURKAIP1Q9NWT8 199 aaPredicted RBP4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 CPNE7Q9UBL6 633 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 SRRDQ9UH36 339 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 CDYLQ9Y232 598 aa4.35□□□□□ -1.71
AC055855.1-201ENST00000489563 M0QYG6 137 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 MYO1CO00159 1063 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 MYO1FO00160 1098 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 BTN3A1O00481 513 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 TBX3O15119 743 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 RPS6KA4O75676 772 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 CHEK2O96017 543 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 THP07101 528 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 SLC5A1P13866 664 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 RPL17P18621 184 aaKnown RBP4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 EN2P19622 333 aaPredicted RBP4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 GCSHP23434 173 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 ACRV1P26436 265 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 MAGEA10P43363 369 aaPredicted RBP4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 PTTG1IPP53801 180 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 FMO1Q01740 532 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 ZNF844Q08AG5 666 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 IFIT5Q13325 482 aaKnown RBP4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 AMOTQ4VCS5 1084 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 RABL3Q5HYI8 236 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 CRB2Q5IJ48 1285 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 METRNLQ641Q3 311 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 GDF7Q7Z4P5 450 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 TMPRSS6Q8IU80 811 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 C1orf210Q8IVY1 113 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 KRT78Q8N1N4 520 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 PDPRQ8NCN5 879 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 SVIPQ8NHG7 77 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 DVL3Q92997 716 aaPredicted RBP4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 PHKBQ93100 1093 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 TBCBQ99426 244 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 NAA15Q9BXJ9 866 aaKnown RBP4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 TLR10Q9BXR5 811 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 TRIM54Q9BYV2 358 aa4.34□□□□□ -1.71
AC055855.1-201ENST00000489563 KLHL11Q9NVR0 708 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms