RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 RTL10Q7L3V2 364 aa27.08■■□□□ 1.93
HMGN1-217ENST00000489072 MFSD14AQ96MC6 490 aa27.08■■□□□ 1.93
HMGN1-217ENST00000489072 MAGEF1Q9HAY2 307 aa27.08■■□□□ 1.93
HMGN1-217ENST00000489072 OAZ2O95190 189 aa27.07■■□□□ 1.92
HMGN1-217ENST00000489072 SEC24AO95486 1093 aa27.07■■□□□ 1.92
HMGN1-217ENST00000489072 ATF2P15336 505 aa27.07■■□□□ 1.92
HMGN1-217ENST00000489072 HOXD13P35453 343 aa27.07■■□□□ 1.92
HMGN1-217ENST00000489072 RSAD2Q8WXG1 361 aa27.07■■□□□ 1.92
HMGN1-217ENST00000489072 BLZF1Q9H2G9 400 aa27.07■■□□□ 1.92
HMGN1-217ENST00000489072 PCIF1Q9H4Z3 704 aa27.07■■□□□ 1.92
HMGN1-217ENST00000489072 TMEM206Q9H813 350 aa27.07■■□□□ 1.92
HMGN1-217ENST00000489072 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.07■■□□□ 1.92
HMGN1-217ENST00000489072 DNMT3BQ9UBC3 853 aaKnown RBP27.07■■□□□ 1.92
HMGN1-217ENST00000489072 KMT2EQ8IZD2 1858 aa27.06■■□□□ 1.92
HMGN1-217ENST00000489072 ARHGEF37A1IGU5 675 aa27.06■■□□□ 1.92
HMGN1-217ENST00000489072 GOLGA8IPA6NC78 632 aa27.06■■□□□ 1.92
HMGN1-217ENST00000489072 GOLGA8JA6NMD2 632 aa27.06■■□□□ 1.92
HMGN1-217ENST00000489072 IL18RAPO95256 599 aa27.06■■□□□ 1.92
HMGN1-217ENST00000489072 PDGFBP01127 241 aaPredicted RBP27.06■■□□□ 1.92
HMGN1-217ENST00000489072 LAMP2P13473 410 aa27.06■■□□□ 1.92
HMGN1-217ENST00000489072 YWHAHQ04917 246 aaPredicted RBP27.06■■□□□ 1.92
HMGN1-217ENST00000489072 TPGS2Q68CL5 300 aa27.06■■□□□ 1.92
HMGN1-217ENST00000489072 EPM2AIP1Q7L775 607 aaPredicted RBP27.06■■□□□ 1.92
HMGN1-217ENST00000489072 BRSK2Q8IWQ3 736 aa27.06■■□□□ 1.92
HMGN1-217ENST00000489072 TCEAL8Q8IYN2 117 aa27.06■■□□□ 1.92
HMGN1-217ENST00000489072 LEO1Q8WVC0 666 aaPredicted RBP27.06■■□□□ 1.92
HMGN1-217ENST00000489072 SENP8Q96LD8 212 aa27.06■■□□□ 1.92
HMGN1-217ENST00000489072 DPP3Q9NY33 737 aa27.06■■□□□ 1.92
HMGN1-217ENST00000489072 IGSF9Q9P2J2 1179 aa27.06■■□□□ 1.92
HMGN1-217ENST00000489072 KCNH3Q9ULD8 1083 aa27.06■■□□□ 1.92
HMGN1-217ENST00000489072 PRRG1O14668 218 aa27.05■■□□□ 1.92
HMGN1-217ENST00000489072 ELF1P32519 619 aa27.05■■□□□ 1.92
HMGN1-217ENST00000489072 EHHADHQ08426 723 aa27.05■■□□□ 1.92
HMGN1-217ENST00000489072 TDGQ13569 410 aa27.05■■□□□ 1.92
HMGN1-217ENST00000489072 FAM26FQ5R3K3 315 aa27.05■■□□□ 1.92
HMGN1-217ENST00000489072 GRAMD1CQ8IYS0 662 aa27.05■■□□□ 1.92
HMGN1-217ENST00000489072 FBXL6Q8N531 539 aa27.05■■□□□ 1.92
HMGN1-217ENST00000489072 ITFG1Q8TB96 612 aa27.05■■□□□ 1.92
HMGN1-217ENST00000489072 CYP4F11Q9HBI6 524 aa27.05■■□□□ 1.92
HMGN1-217ENST00000489072 ARIH1Q9Y4X5 557 aaPredicted RBP27.05■■□□□ 1.92
HMGN1-217ENST00000489072 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.04■■□□□ 1.92
HMGN1-217ENST00000489072 EXTL3O43909 919 aa27.04■■□□□ 1.92
HMGN1-217ENST00000489072 LDHAP00338 332 aaKnown RBP27.04■■□□□ 1.92
HMGN1-217ENST00000489072 TYMPP19971 482 aa27.04■■□□□ 1.92
HMGN1-217ENST00000489072 AFMP43652 599 aa27.04■■□□□ 1.92
HMGN1-217ENST00000489072 ARMCX5Q6P1M9 558 aa27.04■■□□□ 1.92
HMGN1-217ENST00000489072 RNF19BQ6ZMZ0 732 aa27.04■■□□□ 1.92
HMGN1-217ENST00000489072 STXBP4Q6ZWJ1 553 aa27.04■■□□□ 1.92
HMGN1-217ENST00000489072 UNC13DQ70J99 1090 aa27.04■■□□□ 1.92
HMGN1-217ENST00000489072 RBAKQ9NYW8 714 aaPredicted RBP27.04■■□□□ 1.92
HMGN1-217ENST00000489072 AFF4Q9UHB7 1163 aaKnown RBP27.04■■□□□ 1.92
HMGN1-217ENST00000489072 SERTAD1Q9UHV2 236 aa27.04■■□□□ 1.92
HMGN1-217ENST00000489072 INSL5Q9Y5Q6 135 aa27.04■■□□□ 1.92
HMGN1-217ENST00000489072 EIF3DO15371 548 aaKnown RBP eCLIP27.03■■□□□ 1.92
HMGN1-217ENST00000489072 VNN2O95498 520 aa27.03■■□□□ 1.92
HMGN1-217ENST00000489072 OR4Q2P0C623 313 aa27.03■■□□□ 1.92
HMGN1-217ENST00000489072 CPB1P15086 417 aa27.03■■□□□ 1.92
HMGN1-217ENST00000489072 ADCY1Q08828 1119 aa27.03■■□□□ 1.92
HMGN1-217ENST00000489072 CUL4BQ13620 913 aa27.03■■□□□ 1.92
HMGN1-217ENST00000489072 OVOS1Q6IE37 1185 aa27.03■■□□□ 1.92
HMGN1-217ENST00000489072 USP37Q86T82 979 aa27.03■■□□□ 1.92
HMGN1-217ENST00000489072 NT5DC4Q86YG4 428 aa27.03■■□□□ 1.92
HMGN1-217ENST00000489072 ST13P5Q8NFI4 369 aaPredicted RBP27.03■■□□□ 1.92
HMGN1-217ENST00000489072 ZNF507Q8TCN5 953 aa27.03■■□□□ 1.92
HMGN1-217ENST00000489072 FAM84AQ96KN4 292 aa27.03■■□□□ 1.92
HMGN1-217ENST00000489072 SPATA32Q96LK8 384 aa27.03■■□□□ 1.92
HMGN1-217ENST00000489072 CDH7Q9ULB5 785 aa27.03■■□□□ 1.92
HMGN1-217ENST00000489072 DUSP12Q9UNI6 340 aa27.03■■□□□ 1.92
HMGN1-217ENST00000489072 ACTN4O43707 911 aaKnown RBP27.02■■□□□ 1.92
HMGN1-217ENST00000489072 NARSO43776 548 aaKnown RBP27.02■■□□□ 1.92
HMGN1-217ENST00000489072 LRG1P02750 347 aa27.02■■□□□ 1.92
HMGN1-217ENST00000489072 ODC1P11926 461 aa27.02■■□□□ 1.92
HMGN1-217ENST00000489072 PAX3P23760 479 aa27.02■■□□□ 1.92
HMGN1-217ENST00000489072 KRT85P78386 507 aa27.02■■□□□ 1.92
HMGN1-217ENST00000489072 PABPC1LQ4VXU2 614 aaKnown RBP27.02■■□□□ 1.92
HMGN1-217ENST00000489072 NOC3LQ8WTT2 800 aaKnown RBP27.02■■□□□ 1.92
HMGN1-217ENST00000489072 FGF13Q92913 245 aa27.02■■□□□ 1.92
HMGN1-217ENST00000489072 A0A1B0GVL5 298 aa27.01■■□□□ 1.91
HMGN1-217ENST00000489072 OR6C75A6NL08 312 aa27.01■■□□□ 1.91
HMGN1-217ENST00000489072 ANHXE9PGG2 379 aa27.01■■□□□ 1.91
HMGN1-217ENST00000489072 TULP1O00294 542 aaPredicted RBP27.01■■□□□ 1.91
HMGN1-217ENST00000489072 SLFN14P0C7P3 912 aa27.01■■□□□ 1.91
HMGN1-217ENST00000489072 PFKFB1P16118 471 aa27.01■■□□□ 1.91
HMGN1-217ENST00000489072 TAF6P49848 677 aa27.01■■□□□ 1.91
HMGN1-217ENST00000489072 TFAMQ00059 246 aaKnown RBP27.01■■□□□ 1.91
HMGN1-217ENST00000489072 HTR4Q13639 388 aa27.01■■□□□ 1.91
HMGN1-217ENST00000489072 SCARA3Q6AZY7 606 aa27.01■■□□□ 1.91
HMGN1-217ENST00000489072 SUGP1Q8IWZ8 645 aaKnown RBP27.01■■□□□ 1.91
HMGN1-217ENST00000489072 GPD1LQ8N335 351 aa27.01■■□□□ 1.91
HMGN1-217ENST00000489072 SLC44A3Q8N4M1 653 aa27.01■■□□□ 1.91
HMGN1-217ENST00000489072 BORCS6Q96GS4 357 aa27.01■■□□□ 1.91
HMGN1-217ENST00000489072 PYM1Q9BRP8 204 aaKnown RBP27.01■■□□□ 1.91
HMGN1-217ENST00000489072 OXCT2Q9BYC2 517 aaPredicted RBP27.01■■□□□ 1.91
HMGN1-217ENST00000489072 PDE11AQ9HCR9 933 aa27.01■■□□□ 1.91
HMGN1-217ENST00000489072 ZFP37Q9Y6Q3 630 aaPredicted RBP27.01■■□□□ 1.91
HMGN1-217ENST00000489072 TGFB1I1O43294 461 aa27■■□□□ 1.91
HMGN1-217ENST00000489072 CYP11A1P05108 521 aa27■■□□□ 1.91
HMGN1-217ENST00000489072 RHOP08100 348 aa27■■□□□ 1.91
HMGN1-217ENST00000489072 CMA1P23946 247 aa27■■□□□ 1.91
HMGN1-217ENST00000489072 VCPP55072 806 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms