RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 SRRTQ9BXP5 876 aaKnown RBP16.35■□□□□ 0.21
FDPS-213ENST00000489003 PCDHB8Q9UN66 801 aa16.35■□□□□ 0.21
FDPS-213ENST00000489003 KPNA7A9QM74 516 aa16.34■□□□□ 0.21
FDPS-213ENST00000489003 SYN3O14994 580 aa16.34■□□□□ 0.21
FDPS-213ENST00000489003 BFSP1Q12934 665 aa16.34■□□□□ 0.21
FDPS-213ENST00000489003 CTC1Q2NKJ3 1217 aa16.34■□□□□ 0.21
FDPS-213ENST00000489003 KLHL40Q2TBA0 621 aa16.34■□□□□ 0.21
FDPS-213ENST00000489003 VARS2Q5ST30 1063 aaKnown RBP16.34■□□□□ 0.21
FDPS-213ENST00000489003 SASS6Q6UVJ0 657 aa16.34■□□□□ 0.21
FDPS-213ENST00000489003 RSPO2Q6UXX9 243 aaPredicted RBP16.34■□□□□ 0.21
FDPS-213ENST00000489003 SV2AQ7L0J3 742 aa16.34■□□□□ 0.21
FDPS-213ENST00000489003 LRRC52Q8N7C0 313 aa16.34■□□□□ 0.21
FDPS-213ENST00000489003 SLC22A17Q8WUG5 538 aa16.34■□□□□ 0.21
FDPS-213ENST00000489003 CLSTN3Q9BQT9 956 aa16.34■□□□□ 0.21
FDPS-213ENST00000489003 EMILIN2Q9BXX0 1053 aa16.34■□□□□ 0.21
FDPS-213ENST00000489003 PRDM6Q9NQX0 595 aa16.34■□□□□ 0.21
FDPS-213ENST00000489003 FNIP2Q9P278 1114 aa16.34■□□□□ 0.21
FDPS-213ENST00000489003 TIMM13Q9Y5L4 95 aaPredicted RBP16.34■□□□□ 0.21
FDPS-213ENST00000489003 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.33■□□□□ 0.2
FDPS-213ENST00000489003 SLC16A3O15427 465 aaKnown RBP16.33■□□□□ 0.2
FDPS-213ENST00000489003 TEX28O15482 410 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 LINC01565O15544 149 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 NCK2O43639 380 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 TBC1D4O60343 1298 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 TRIM49P0CI25 452 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 TRIM49CP0CI26 452 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 RPL17P18621 184 aaKnown RBP16.33■□□□□ 0.2
FDPS-213ENST00000489003 KLRC2P26717 231 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 ERCC5P28715 1186 aaPredicted RBP16.33■□□□□ 0.2
FDPS-213ENST00000489003 LTBRP36941 435 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 PNPLA4P41247 253 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 RBM10P98175 930 aaKnown RBP16.33■□□□□ 0.2
FDPS-213ENST00000489003 PPP3CAQ08209 521 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 KCNC3Q14003 757 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 COL19A1Q14993 1142 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 SKIV2LQ15477 1246 aaKnown RBP16.33■□□□□ 0.2
FDPS-213ENST00000489003 PSMD5Q16401 504 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 ZACNQ401N2 412 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 SV2CQ496J9 727 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 CT47A1Q5JQC4 288 aaPredicted RBP16.33■□□□□ 0.2
FDPS-213ENST00000489003 TDRD10Q5VZ19 366 aaKnown RBP16.33■□□□□ 0.2
FDPS-213ENST00000489003 C15orf39Q6ZRI6 1047 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 FRMD5Q7Z6J6 570 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 USP37Q86T82 979 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 EFHBQ8N7U6 833 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 APPL2Q8NEU8 664 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 PABPC5Q96DU9 382 aaKnown RBP16.33■□□□□ 0.2
FDPS-213ENST00000489003 HPDLQ96IR7 371 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 ZNF560Q96MR9 790 aa16.33■□□□□ 0.2
FDPS-213ENST00000489003 CDCA3Q99618 268 aaPredicted RBP16.33■□□□□ 0.2
FDPS-213ENST00000489003 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.33■□□□□ 0.2
FDPS-213ENST00000489003 CYB561D2O14569 222 aa16.32■□□□□ 0.2
FDPS-213ENST00000489003 ADAM12O43184 909 aa16.32■□□□□ 0.2
FDPS-213ENST00000489003 PHACTR2O75167 634 aa16.32■□□□□ 0.2
FDPS-213ENST00000489003 OAZ2O95190 189 aa16.32■□□□□ 0.2
FDPS-213ENST00000489003 VNN1O95497 513 aa16.32■□□□□ 0.2
FDPS-213ENST00000489003 TYMPP19971 482 aa16.32■□□□□ 0.2
FDPS-213ENST00000489003 GCLMP48507 274 aa16.32■□□□□ 0.2
FDPS-213ENST00000489003 TRPC3Q13507 836 aa16.32■□□□□ 0.2
FDPS-213ENST00000489003 PDXDC1Q6P996 788 aa16.32■□□□□ 0.2
FDPS-213ENST00000489003 ANKS3Q6ZW76 656 aa16.32■□□□□ 0.2
FDPS-213ENST00000489003 VN1R2Q8NFZ6 395 aa16.32■□□□□ 0.2
FDPS-213ENST00000489003 METTL14Q9HCE5 456 aaKnown RBP16.32■□□□□ 0.2
FDPS-213ENST00000489003 GDAP2Q9NXN4 497 aa16.32■□□□□ 0.2
FDPS-213ENST00000489003 CLDND1Q9NY35 253 aa16.32■□□□□ 0.2
FDPS-213ENST00000489003 MTRRQ9UBK8 725 aa16.32■□□□□ 0.2
FDPS-213ENST00000489003 ARMCX3Q9UH62 379 aaPredicted RBP16.32■□□□□ 0.2
FDPS-213ENST00000489003 DACH1Q9UI36 760 aa16.32■□□□□ 0.2
FDPS-213ENST00000489003 R3HCC1Q9Y3T6 440 aaKnown RBP16.32■□□□□ 0.2
FDPS-213ENST00000489003 MTCL1Q9Y4B5 1905 aaKnown RBP16.32■□□□□ 0.2
FDPS-213ENST00000489003 BACE2Q9Y5Z0 518 aa16.32■□□□□ 0.2
FDPS-213ENST00000489003 FGFR1OPO95684 399 aaKnown RBP16.31■□□□□ 0.2
FDPS-213ENST00000489003 MYL6P60660 151 aa16.31■□□□□ 0.2
FDPS-213ENST00000489003 DLX2Q07687 328 aaPredicted RBP16.31■□□□□ 0.2
FDPS-213ENST00000489003 BIRC3Q13489 604 aa16.31■□□□□ 0.2
FDPS-213ENST00000489003 SKOR2Q2VWA4 1001 aaPredicted RBP16.31■□□□□ 0.2
FDPS-213ENST00000489003 LILRA6Q6PI73 481 aa16.31■□□□□ 0.2
FDPS-213ENST00000489003 TMEM184AQ6ZMB5 413 aa16.31■□□□□ 0.2
FDPS-213ENST00000489003 PPFIBP1Q86W92 1011 aa16.31■□□□□ 0.2
FDPS-213ENST00000489003 PALB2Q86YC2 1186 aa16.31■□□□□ 0.2
FDPS-213ENST00000489003 IRF2BP1Q8IU81 584 aa16.31■□□□□ 0.2
FDPS-213ENST00000489003 GLYCTKQ8IVS8 523 aa16.31■□□□□ 0.2
FDPS-213ENST00000489003 SYAP1Q96A49 352 aaPredicted RBP16.31■□□□□ 0.2
FDPS-213ENST00000489003 ANO10Q9NW15 660 aa16.31■□□□□ 0.2
FDPS-213ENST00000489003 SNX9Q9Y5X1 595 aa16.31■□□□□ 0.2
FDPS-213ENST00000489003 HCFC2Q9Y5Z7 792 aa16.31■□□□□ 0.2
FDPS-213ENST00000489003 REV3LO60673 3130 aa16.31■□□□□ 0.2
FDPS-213ENST00000489003 H7C4K7 107 aa16.3■□□□□ 0.2
FDPS-213ENST00000489003 STAU1O95793 577 aaKnown RBP16.3■□□□□ 0.2
FDPS-213ENST00000489003 GNA14O95837 355 aa16.3■□□□□ 0.2
FDPS-213ENST00000489003 GLP2RO95838 553 aa16.3■□□□□ 0.2
FDPS-213ENST00000489003 CYP11A1P05108 521 aa16.3■□□□□ 0.2
FDPS-213ENST00000489003 ADH1AP07327 375 aa16.3■□□□□ 0.2
FDPS-213ENST00000489003 EPCAMP16422 314 aa16.3■□□□□ 0.2
FDPS-213ENST00000489003 GTF2H1P32780 548 aa16.3■□□□□ 0.2
FDPS-213ENST00000489003 OR1D2P34982 312 aa16.3■□□□□ 0.2
FDPS-213ENST00000489003 NDUFV1P49821 464 aa16.3■□□□□ 0.2
FDPS-213ENST00000489003 CLCN4P51793 760 aa16.3■□□□□ 0.2
FDPS-213ENST00000489003 MYO1EQ12965 1108 aa16.3■□□□□ 0.2
FDPS-213ENST00000489003 NCOA4Q13772 614 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms